|
Name : H681_10810 (H681_10810) Accession : YP_007657574.1 Strain : Pseudomonas denitrificans ATCC 13867 Genome accession: NC_020829 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 2363411 - 2365024 bp Length : 1614 bp Strand : - Note : COG4172 ABC-type uncharacterized transport system, duplicated ATPase component DNA sequence : ATGACCCACAGCGAAAACCTCATCGAAGTCCGCGACCTCTCGGTGGACTTCCTCTGCGGCAACGAGACGGTCCATGCGGT GGAGAAGATCAGCTTCGACATCCGCAAAGGCGAGACCCTGGCACTGGTGGGCGAAAGCGGCTCCGGCAAGTCGGTGAGCG CCCACTCCATCCTGCGCCTGCTGCCCTACCCCACGGCCAGCCACCCTTCCGGCAGCATCCACTACGCCGGCAAGGATCTG CTGAAGCTGCCCGAAAGCAAGCTGCGCGGCATTCGCGGCAACCGCATCGCGATGGTGTTCCAGGAGCCGATGACCTCGCT GAACCCGCTGCACACCATCGAGAAGCAGATCGGCGAAGTCCTGGCCCTGCACAAGGGCATGAACTCCGCCCAGGCGCGGG CGCGCACCCTGGAGCTGCTGGACCTGGTCGGCATTCCCAACCCGGCCAGTCGCCTGAAGGCCTATCCCCACGAACTCTCC GGCGGCCAGCGGCAACGGGTGATGATCGCAATGGCGCTGGCCTGCGAGCCGGAACTATTGATCGCCGACGAGCCGACCAC CGCGCTGGACGTCACCGTGCAGCTGAAGATCCTCGACCTGCTGCGCGACCTGCAGCAGCGCCTGGGCATGGCCATGCTGC TGATCACCCACGATCTCAACCTGGTGCGACGTATCGCCCACCGCGTGTGCGTCATGCAGCATGGCTGCATCGTCGAACAG GCACCGTGCGAGAGTCTGTTCGAGTCGCCCCAGCATCCCTACACCCGTGAACTGCTGGGCGCGGAGCCCAGCGGCAATCC GGCCGACAACCCGCCCGGCCCGGCGCTGCTGGACGTGAACGACCTGCGGGTCTGGTTCCCGATCAAGAAAGGCGTGTTCC GCCGCACAGTGGATCACGTCAAGGCGGTGGACGGCATCGACTTCAGCCTGCCCCGCGGGCAGACCCTGGGCATCGTCGGC GAAAGCGGCTCGGGCAAGTCCACCCTCGGCCTGGCCATCCTGCGCCTGATCAACAGCCAGGGCGGTATCCGCTTCGAAGG CAACAACCTGGAAGGCATGAACCAGAGCGAAGTGCGCCCCTTGCGGCGCGAAATGCAGGTGGTCTTCCAGGATCCCTTCG GCAGCCTGAGTCCGCGCATGTCGGTGGGGCAGATCGTCGGTGAAGGCCTGGAGATCCACGGAATCGGCACTCCCGAGGAA CGCGAGCAGGCCATCATCGATGCGCTGAAGGAAGTCGGCCTCGACCCGGACACCCGCCACCGCTATCCCCACGAATTCTC CGGCGGGCAGCGGCAGCGCATCGCCATTGCCAGGGCCCTGGTGCTCAAGCCGGCGCTGATCCTGCTCGACGAACCGACCT CGGCGCTCGACCGCACCGTGCAGCGCCAGGTGGTGGAACTGCTGCGCCGCCTGCAGGCCAAGTACAACCTGACCTACCTG TTCATCAGCCATGACCTGGCGGTGGTCAAGGCGCTGAGCCACCAACTGATGGTGATCCGCCACGGCAAGGTAGTCGAACA GGGCTCGGCGGAGCAGGTGTTCTCCGCGCCGCAGCACGCCTATACGCAACAACTGCTGGAAGCCGCCTTCATGGTTCCGG CGCACACGCACTGA Protein sequence : MTHSENLIEVRDLSVDFLCGNETVHAVEKISFDIRKGETLALVGESGSGKSVSAHSILRLLPYPTASHPSGSIHYAGKDL LKLPESKLRGIRGNRIAMVFQEPMTSLNPLHTIEKQIGEVLALHKGMNSAQARARTLELLDLVGIPNPASRLKAYPHELS GGQRQRVMIAMALACEPELLIADEPTTALDVTVQLKILDLLRDLQQRLGMAMLLITHDLNLVRRIAHRVCVMQHGCIVEQ APCESLFESPQHPYTRELLGAEPSGNPADNPPGPALLDVNDLRVWFPIKKGVFRRTVDHVKAVDGIDFSLPRGQTLGIVG ESGSGKSTLGLAILRLINSQGGIRFEGNNLEGMNQSEVRPLRREMQVVFQDPFGSLSPRMSVGQIVGEGLEIHGIGTPEE REQAIIDALKEVGLDPDTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRRLQAKYNLTYL FISHDLAVVKALSHQLMVIRHGKVVEQGSAEQVFSAPQHAYTQQLLEAAFMVPAHTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-83 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-83 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-83 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-83 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-99 | 43 |
