Gene Information

Name : tpx (H681_10060)
Accession : YP_007657426.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : lipid hydroperoxide peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2200195 - 2200695 bp
Length : 501 bp
Strand : +
Note : COG2077 Peroxiredoxin

DNA sequence :
ATGGCTCAAGTCACCCTCAAGGGCAATCCGGTTTCCGTCGATGGCAAGCTGCCGCAGAAAGGCGAGCAGGCTCCGGCCCT
CGCGCTGGTCGCTGGCGACCTCTCCGACGTCACCCTGGAAAACTACGCCGGCAAGCGCAAGGTGCTGAACATCTTCCCCA
GCGTCGACACCCCGACCTGCGCCACCTCCGTGCGCAAGTTCAACGCCGAGGCCAGCAAGCTGGCCAACACCGTAGTGCTG
TGCGTTTCCGCTGACCTGCCGTTCGCCCAGGCGCGCTTCTGCGGCGCCGAGGGTCTGGAGAACGTGGTCAACCTGTCCAC
CCTGCGTGGCCGCGAGTTCCTCGCCAACTACGGCGTGGCCATCTCCAGCGGCCCGCTGGTCGGCCTGGCTGCCCGCGCAG
TCGTGGTGCTGGACGAGCAGAACAAGGTGCTGCACAGCGAGCTGGTTGGCGAGATCGCCGACGAGCCGAACTACGCCGCC
GCCATCGCCGCCCTGGCCTGA

Protein sequence :
MAQVTLKGNPVSVDGKLPQKGEQAPALALVAGDLSDVTLENYAGKRKVLNIFPSVDTPTCATSVRKFNAEASKLANTVVL
CVSADLPFAQARFCGAEGLENVVNLSTLRGREFLANYGVAISSGPLVGLAARAVVVLDEQNKVLHSELVGEIADEPNYAA
AIAALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 3e-29 46
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 4e-29 46
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 4e-29 46
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 3e-29 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_007657426.1 lipid hydroperoxide peroxidase VFG0087 Protein 1e-29 46