|
Name : H681_07880 (H681_07880) Accession : YP_007656992.1 Strain : Pseudomonas denitrificans ATCC 13867 Genome accession: NC_020829 Putative virulence/resistance : Resistance Product : D-lactate dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 1716122 - 1717108 bp Length : 987 bp Strand : - Note : COG1052 Lactate dehydrogenase and related dehydrogenases DNA sequence : ATGCGCATCATCCTGTTCAGCAACCAGCCCTACGACCACGACAGCTTCCTCGCCGCCAACCACAGCCACGGCTTCGAACT GCACTTCCAGCAGGCGCAGTTGCGCCTGGACACCGTGGCCCTGGCCAGGGACTTCGACGTGGTCTGCCCCTTCGTCAACG ACGAGCTGTCGCGACCGGTACTGGAACAGTTGGCCGCCGGCGGCACGCGCCTGATCGCCCTGCGCTCGGCCGGCTACAAC CATGTCGACCTCAAGGCCGCCCACGCCCTGGGGCTTTCCGTGGTGCGGGTTCCGGCCTATTCGCCCCATGCCGTGGCCGA ACATGCCGTGGGATTGGTCCTGGCGCTCTGTCGGCACCTGCACCGCGCCTACAACCGCACCCGCGATGGCGACTTCTCGC TACACGGACTGACCGGCTTCGACCTGCACGGGCGCACGGTCGGCGTCATCGGCAGCGGCCAGATCGGCGAAGTCTTCGCC CGCATCATGAGCGGCTTCGGCTGCCACATCCTCGCCTACGACCCCTACCCCAACCGCGCCATCGAAGCCCTGGGCGGCCG TTTCGTCGAACTGGACGAACTGCTCGCCCAGTCCGACATCCTCAGCCTGCACTGTCCGCTCAACGACGCCACCCGGCACC TGATCAACCCTCGCAGCCTGCAACAGATGAAACGCGGCGCCATGCTGATCAACACCGGGCGCGGCGCGCTGGTGGACACC CCGGCGCTGATCGAGGCGCTCAAGAGCGGCCAGCTCGGCTACCTGGGCCTGGACGTCTATGAAGAAGAAGCCGAAATCTT CTTCGCCGACCGCTCCGACCTGCCGCTACAGGATGACGTCCTGGCGCGCCTGCTGACCTTCCCCAACGTCATCATCACCG CCCACCAGGCATTCCTGACCCGCGAGGCGCTGGCCGCCATCGCCGAAACCACCCTGGCCAACATCGGCGCCTGGCAGGCG GGTAACCCCGTCAACCAGGTCAGCTAA Protein sequence : MRIILFSNQPYDHDSFLAANHSHGFELHFQQAQLRLDTVALARDFDVVCPFVNDELSRPVLEQLAAGGTRLIALRSAGYN HVDLKAAHALGLSVVRVPAYSPHAVAEHAVGLVLALCRHLHRAYNRTRDGDFSLHGLTGFDLHGRTVGVIGSGQIGEVFA RIMSGFGCHILAYDPYPNRAIEALGGRFVELDELLAQSDILSLHCPLNDATRHLINPRSLQQMKRGAMLINTGRGALVDT PALIEALKSGQLGYLGLDVYEEEAEIFFADRSDLPLQDDVLARLLTFPNVIITAHQAFLTREALAAIAETTLANIGAWQA GNPVNQVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2295 | NP_815952.1 | D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 5e-42 | 47 |
| vanHB | YP_008394258.1 | VanH protein, D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 2e-41 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H681_07880 | YP_007656992.1 | D-lactate dehydrogenase | U35369.1.gene5.p01 | Protein | 9e-42 | 46 |
| H681_07880 | YP_007656992.1 | D-lactate dehydrogenase | AF310956.2.orf4.gene | Protein | 4e-42 | 46 |
| H681_07880 | YP_007656992.1 | D-lactate dehydrogenase | NC_005054.2598279.p0 | Protein | 1e-39 | 44 |
| H681_07880 | YP_007656992.1 | D-lactate dehydrogenase | AF155139.2.orf4.gene | Protein | 1e-41 | 44 |
| H681_07880 | YP_007656992.1 | D-lactate dehydrogenase | NC_014475.1.orf2.gen | Protein | 1e-39 | 44 |
