Gene Information

Name : LVISKB_P2-0015 (LVISKB_P2-0015)
Accession : YP_007655283.1
Strain :
Genome accession: NC_020821
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit ClpL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 14065 - 16179 bp
Length : 2115 bp
Strand : -
Note : -

DNA sequence :
ATGGCGAATTTCTACGAAAATGATCCTTTTTTCAACAATGACATGGATGATGTTTTCAATCAATTATTTCGGCGCATGGA
TAATCAAAATTCGGAGCGTGCACGGTACTTAGTTAATGGAAAATCGTTGACACCAGATGAGTTTGCTCAATACCGAGCAA
CTGGTAAGCTACCCCAAAATAATAAAACAATAGAAGTATCTAAAGATGGTAAACAGGCTTTTAAAAAAGGAGGGATTTTA
GAAAAGTTAGGGACTAATTTGACGGAACAGGCTCGTGATGGATTACTAGATCCAGTGATTGGACGTGAGAATGAGATTCA
AGAAACTGCAGAAATTTTGAGTCGTAGAACGAAAAACAATCCAATCTTAGTTGGTGACGCCGGTGTAGGTAAAACTGCAG
TCGTCGAAGGTCTGGCACAAGCAATTGTGGCTGGTAAAGTTCCAGAAACGATTCAAGATAAAGAAATCTATTCGATTGAT
TTATCGTCTTTGGAAGCAGGAACTCAATATCGCGGTTCTTTTGAAGAGAATATTAAACAGCTGGTAAAGGAAGTTAAAGC
AGCTGGTAATATTATTCTATTCTTCGATGAAATTCATCAGATTATCGGCACGGGTGCCACTGGTGGTGAAGACGGTGGCA
AGGGATTGGCTGATATCATTAAACCTGCTTTGTCACGTGGTGAGCTGACTGTAATCGGGGCTACGACTCAAGATGAATAT
CGCAATACTATTTTGAAAAATGCGGCTTTGGCACGGCGATTCAATGATGTTATGATTAATGAACCGACGGCCGCTGACAC
TTTACGTATATTACAAGGTGTTAAAAAGCTGTACGAAAAGCATCATCATGTTGTATTACCAGATGATGTTTTGAAGGCGG
CTGTGGATTATTCAATCCAATATATACCACAACGTACTTTGCCAGATAAAGCTATCGATTTGATCGACATGACTGCGGCT
CATTTAGCGGCTAAAAATTCGCAAACTGATGTTGAGACATTGGATCAACGCGTTAAAAAATTAGAGGCAGCTAAGGAGGC
CGCCGTTAAATCGGAGGACTTTACAAAAGCCGCTGATATCAAGAAGTCGATCGAGGAAACCAAGCAAAAAATTAAAAAAA
CGGATCAAAAAGAAAAAATCACTGCCACGATTGATGATGTGGCACAATCGGTTGAACGTTTAACTGGTATACCCGTTGCT
GATATGGGCGCTAATGATATTGAGCACTTGAAAAATCTTGATAAGCGTCTGAAAAGTAAGGTAATCGGTCAAGATGAAGC
GGTTGAAATGGTAGCGAAGGCAATTCGGCGTAACCGTGCGGGCTTTTCAGAGGGTGATCAGCCAATTGGAAGTTTTCTGT
TTGTGGGCCCAACTGGCGTAGGAAAGACTGAATTAGCTAAGCAATTAGCCTTAGATATGTTTGGAAATAAAAATGCGATT
ATTCGGCTAGATATGAGTGAATATGCTGATCGTACAGCTGTGTCGAAATTAATTGGTACCTCGGCTGGATACGTAGGCTA
TGAAGATAATGCTAATACTCTAACTGAACGGGTTCGGCGTAATCCATATTCCATTGTATTATTAGATGAAATTGAAAAGG
CTGATCCACAAGTATTAACGTTACTGTTACAAGTGATGGATGATGGGCGCTTAACGGATGGACAAGGCAATGTCATTAAT
TTCAAAAATACGATTATTATCGCTACTTCTAATGCTGGCTTTGGTAATGAAGCATTAAGTGGTGACAAGCAACGAGATCA
GTCATTAATGGATAAGTTAGCACCATTTTTCCGCCCAGAATTTCTGAACCGTTTTAATGGAATCGTGGAGTTTTCACATC
TGACTAAGCAAGACTTAAGTCAAATTGTCGATTTGATGTTGGCGGATGTACAAAAAACGTTAGCCAAAAAATCCATCAAA
CTTGAGGTAACTAAAGCGGCCAAGGATTGGCTGATGGAACAAGGCTATGATGAAGCAATGGGTGCGCGGCCATTACGGCG
AGTAATTGAACAACAAATTCGTGATAAGGTAACGGATTTCTACCTTGACCACTTAGATGTCAAAAACTTGAAGGCTGATT
TAGTGGATGCTGAGATTGTGATATCGGCAGCTTAG

Protein sequence :
MANFYENDPFFNNDMDDVFNQLFRRMDNQNSERARYLVNGKSLTPDEFAQYRATGKLPQNNKTIEVSKDGKQAFKKGGIL
EKLGTNLTEQARDGLLDPVIGRENEIQETAEILSRRTKNNPILVGDAGVGKTAVVEGLAQAIVAGKVPETIQDKEIYSID
LSSLEAGTQYRGSFEENIKQLVKEVKAAGNIILFFDEIHQIIGTGATGGEDGGKGLADIIKPALSRGELTVIGATTQDEY
RNTILKNAALARRFNDVMINEPTAADTLRILQGVKKLYEKHHHVVLPDDVLKAAVDYSIQYIPQRTLPDKAIDLIDMTAA
HLAAKNSQTDVETLDQRVKKLEAAKEAAVKSEDFTKAADIKKSIEETKQKIKKTDQKEKITATIDDVAQSVERLTGIPVA
DMGANDIEHLKNLDKRLKSKVIGQDEAVEMVAKAIRRNRAGFSEGDQPIGSFLFVGPTGVGKTELAKQLALDMFGNKNAI
IRLDMSEYADRTAVSKLIGTSAGYVGYEDNANTLTERVRRNPYSIVLLDEIEKADPQVLTLLLQVMDDGRLTDGQGNVIN
FKNTIIIATSNAGFGNEALSGDKQRDQSLMDKLAPFFRPEFLNRFNGIVEFSHLTKQDLSQIVDLMLADVQKTLAKKSIK
LEVTKAAKDWLMEQGYDEAMGARPLRRVIEQQIRDKVTDFYLDHLDVKNLKADLVDAEIVISAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-126 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVISKB_P2-0015 YP_007655283.1 ATP-dependent Clp protease ATP-binding subunit ClpL VFG0080 Protein 8e-142 49
LVISKB_P2-0015 YP_007655283.1 ATP-dependent Clp protease ATP-binding subunit ClpL VFG0079 Protein 1e-128 45