Gene Information

Name : LVISKB_0729 (LVISKB_0729)
Accession : YP_007653569.1
Strain : Lactobacillus brevis KB290
Genome accession: NC_020819
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 758338 - 759135 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence : 
GTGCGCACAATTAAAGAATCAACACTAATTAAAATATCAGGAGTGATTGAAATGTCTAAAATTCTTTTAGCTGGTGAATC
ATGGATTTCTACAACGACCGAATATAAAGGCTACGACTCTTTTACCAGTACAAAATTGGAAATTGGCTGTACGAAACTGT
TAGCTGATTTACAACAATTGGGACATCTAGTGACGCACTTGTTAGCTCATGATGTCCCTGAGCATTTTCCTTGGACCAAA
ACAGAACTGGATCAATATGATGTGATTATTTTATCAGATATTGGCTCGAATTCACTTGTGTTGGCTAACCAGGTCTTTGC
CGAAGGAGAATCTACGGTTAACCGAATGGCCTTACTGAAGCAATGGGTGCTAGATGGCGGTGCTTTAATGATGGCTGGCG
GATATTTATCTTTTGGTGGTTTTGAAGGAAAAGCGCATTATCATAATACGCCAGTCGAGGAAGTGCTTCCGGTCCAAATT
TCGGCCTTTGATGACCGAATTGAGGCGCCTCAGGGACTGGTTCCACAAGAGGCTCTAAAAAATGCAATTAGTAGTGGATT
AGGTGAGTTTCCTGGTATCTTAGGGTATCAACAAGTAGTGGCTAAGTCCGATAGTGAGATTCTAATGACAATCGAAAAGG
ACCCGTTATTAGTGATCGGGCAAGCTGGAAAAGGCCGCACGCTAGCTTATATGACAGATATTGCTCCTCACTGGGCGTCT
ACAGATTTTATGTCGTGGGAATATTATGGTGAGTTTTTTTCTCGGTGTATAAATTGGCTCACTCAGGGGAATAAGTAA

Protein sequence : 
MRTIKESTLIKISGVIEMSKILLAGESWISTTTEYKGYDSFTSTKLEIGCTKLLADLQQLGHLVTHLLAHDVPEHFPWTK
TELDQYDVIILSDIGSNSLVLANQVFAEGESTVNRMALLKQWVLDGGALMMAGGYLSFGGFEGKAHYHNTPVEEVLPVQI
SAFDDRIEAPQGLVPQEALKNAISSGLGEFPGILGYQQVVAKSDSEILMTIEKDPLLVIGQAGKGRTLAYMTDIAPHWAS
TDFMSWEYYGEFFSRCINWLTQGNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 7e-43 45
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 7e-43 45
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 2e-42 44
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 3e-42 44
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 3e-42 44
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 5e-45 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVISKB_0729 YP_007653569.1 hypothetical protein VFG0482 Protein 1e-42 44