Gene Information

Name : LVISKB_0068 (LVISKB_0068)
Accession : YP_007652908.1
Strain : Lactobacillus brevis KB290
Genome accession: NC_020819
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 61164 - 62672 bp
Length : 1509 bp
Strand : -
Note : -

DNA sequence :
ATGGGTAACAGCAAAAATAATGCCACGCCGACCGATCTGAACGATCAAATGCAGGTTCGTCGGGATAAAATGAACAAGCT
ACAAGAACAGGGCATCGCGCCTTTCGGTCACCGCTTCGACAGAACTGACAACAGTCAGTCACTCATTGAAAAATACGATA
AGTACGATAAAGAAGAGTTGATGGAAGACAAACATTACGTTGCTGTTGCGGGTCGGATCACCGGTAAGCGCGGTAGCGGT
AAAGCTGGGTTCATCGACCTCCTCGACAGAACTGGTGTTGTTCAGGGATATGCCCGTCAAGACGAACTTGGCGAAGAAAC
TTACGCCCTATATAAAACCCTCGATTTAGGTGACTTCATTGGTGCCAAGGGTTATGTGATTAAAACCAACACCGGTGCTT
TGACATTACGGATGACGGAATTTGAATTCCTCTCCAAGTCATTGCGGCCACTTCCTGATAAATATCATGGGCTAACCAAC
CCCGAAACGATCTACCGTCAACGGTACTTAGATCTGATCTCAAACCGCGAAAGTTTTGACCGGTTCCTCAAGGTCACTAA
GATTAAGAAAGCCATCCAGGAATACTTGGACGGTGAAGGCTACCTCGAAGTTGACACCCCTGTCTTACAAACAGAAGCTG
GTGGTGCTGAAGCCCGGCCATTTATCACCCACTCCAACGCCTTTGATATTCCGTTATATCTCCGGATTGCCACGGAACTT
TACCTCAAGCGTTTGATTGTTGGTGGCTTTGAAAAGGTCTACGAATTGGGCAAGGACTTCCGGAATGAAGGGACCGACTT
ACGGCACAACCCTGAATTTAACATGGTCGAAGTCTATACCGCCTACACCGATTACACGGACGTCATGGACTTGGTTGAAA
ACCTCTTCCGGTTCGTGGCTAACAAGGTTAACGGATCTGGCAAGTTGACGTATCAAGGCAAGGATATCGACTTAGACAGC
GACTTCAAGCGACTCCACATGGTGGACGCCGTGAAGGATGTTACGGGAATCGATTTCTGGCAACCAATGTCTGATGAAGA
TGCGCACAAGTTGGCTGAAGAAAACGGCATTCACTGTGAACCTTACTGGAAAGTCGGTCACATCATCAACGCCTTCTTCG
AGGAAAAGGTTCAAGATACCTTGATTAACCCAACCTTTATCTACGGTCACCCACTGGAAATTTCACCATTGGCAAAGAAG
AACCCGAAAGATGGTCGTTTCACCGACCGGTTCGAATTGTATATCGATGGTAATGAATACGGTAACGCCTTTACCGAATT
AAACGACCCTATCGATCAACGGCAACGTTTCGAATCCCAAGATGCTGAACGAGCTGCTGGGAACGAAGAAGCCCACGGTA
TCGACGAAGATTACGTCGAAGCGATGGAATATGGGATGCCGCCTACTGGTGGTCTGGGTATCGGTATCGACCGGATGACG
ATGTTATTAACTGATTCCACATCTATTCGTGACGTTATGCTCTTCCCAACCATGCGTCCAAACGACTAA

Protein sequence :
MGNSKNNATPTDLNDQMQVRRDKMNKLQEQGIAPFGHRFDRTDNSQSLIEKYDKYDKEELMEDKHYVAVAGRITGKRGSG
KAGFIDLLDRTGVVQGYARQDELGEETYALYKTLDLGDFIGAKGYVIKTNTGALTLRMTEFEFLSKSLRPLPDKYHGLTN
PETIYRQRYLDLISNRESFDRFLKVTKIKKAIQEYLDGEGYLEVDTPVLQTEAGGAEARPFITHSNAFDIPLYLRIATEL
YLKRLIVGGFEKVYELGKDFRNEGTDLRHNPEFNMVEVYTAYTDYTDVMDLVENLFRFVANKVNGSGKLTYQGKDIDLDS
DFKRLHMVDAVKDVTGIDFWQPMSDEDAHKLAEENGIHCEPYWKVGHIINAFFEEKVQDTLINPTFIYGHPLEISPLAKK
NPKDGRFTDRFELYIDGNEYGNAFTELNDPIDQRQRFESQDAERAAGNEEAHGIDEDYVEAMEYGMPPTGGLGIGIDRMT
MLLTDSTSIRDVMLFPTMRPND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-107 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVISKB_0068 YP_007652908.1 Lysyl-tRNA synthetase VFG1668 Protein 2e-107 46