Gene Information

Name : LVISKB_0643 (LVISKB_0643)
Accession : YP_007653483.1
Strain : Lactobacillus brevis KB290
Genome accession: NC_020819
Putative virulence/resistance : Virulence
Product : Alkaline phosphatase synthesis transcriptional regulatory protein phoP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 673284 - 674030 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence : 
TTGGCATTGTCCTATTCAGAGATCAGGAGGGGTAAACCTATGAGTCGAGTCTTAGTCGTTGATGATGAACCCGCTATTGT
GACGTTGTTACAATACAATTTGGAACAAGCAGATTATCAGGTCGTTACCGCTATCGACGGCGAGCAGGCCCTAAATCTCG
CCTTACATGAAAAATTTGATGTAATCTTATTGGACCTGATGCTGCCCAAAATGGATGGGGTGGAAGTGACCAAACGATTG
CGGCAAGAAAAAGTCAAGACGCCGATCATTATGATTACCGCTAAAACCAGCGAATTTGATACCGTCTTTGGTCTGGAGTT
GGGGGCCGATGATTATATTACGAAGCCATTTAGTCCGCGGGAAGTGATTGCCCGGATGAAAGCCGTGATGCGTCGCTACC
ATGAAGAAGAGCCTACCGATGCGGTTCCAAGTCAACAAGGACACCGATTACAGGTGGGGGATCTCACCATTGACCAAGAT
AAATTCCAGGTTAAACGGGGAAATCAAGCGATCGAACTAACCCCTAAGGAATTTGAATTGTTGTTGTTTTTTGCTAAGCG
TCCCGGAAAAGTCTGGAGTCGTGAACAATTACTAGAAGGCGTTTGGGGCTTTGATTACAGTGGGCAAACGCGGATGGTGG
ACATTCACGTCTCCCATTTACGAGAAAAAATTGAGCAAGACTCGAAGCATCCAACGTTACTAAAGACCGTTCGTGGATTT
GGCTACACCTTTGAGGTTCAGCCATGA

Protein sequence : 
MALSYSEIRRGKPMSRVLVVDDEPAIVTLLQYNLEQADYQVVTAIDGEQALNLALHEKFDVILLDLMLPKMDGVEVTKRL
RQEKVKTPIIMITAKTSEFDTVFGLELGADDYITKPFSPREVIARMKAVMRRYHEEEPTDAVPSQQGHRLQVGDLTIDQD
KFQVKRGNQAIELTPKEFELLLFFAKRPGKVWSREQLLEGVWGFDYSGQTRMVDIHVSHLREKIEQDSKHPTLLKTVRGF
GYTFEVQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-41 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP HE999704.1.gene2815. Protein 8e-67 58
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP AE016830.1.gene1681. Protein 3e-63 55
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_003923.1003749.p0 Protein 2e-59 54
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002952.2859905.p0 Protein 1e-59 53
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002758.1121668.p0 Protein 2e-59 53
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_007622.3794472.p0 Protein 1e-59 53
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_009641.5332272.p0 Protein 2e-59 53
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_013450.8614421.p0 Protein 2e-59 53
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_007793.3914279.p0 Protein 2e-59 53
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002745.1124361.p0 Protein 2e-59 53
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_009782.5559369.p0 Protein 2e-59 53
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002951.3237708.p0 Protein 2e-59 53
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_012469.1.7686381. Protein 5e-57 50
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_012469.1.7685629. Protein 1e-48 47
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP AE000516.2.gene3505. Protein 2e-41 44
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP HE999704.1.gene1528. Protein 4e-38 43
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP CP004022.1.gene3215. Protein 1e-36 43
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP AF155139.2.orf0.gene Protein 8e-42 42
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP FJ349556.1.orf0.gene Protein 2e-39 42
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP CP001138.1.gene4273. Protein 2e-31 42
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP NC_002695.1.915041.p Protein 3e-31 41
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP CP000034.1.gene3834. Protein 3e-31 41
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP CP000647.1.gene4257. Protein 1e-31 41
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP BAC0533 Protein 1e-31 41
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP CP004022.1.gene1676. Protein 8e-34 41
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP CP001918.1.gene5135. Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP VFG1563 Protein 1e-41 42
LVISKB_0643 YP_007653483.1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP VFG1702 Protein 1e-41 42