Gene Information

Name : LVISKB_0274 (LVISKB_0274)
Accession : YP_007653114.1
Strain : Lactobacillus brevis KB290
Genome accession: NC_020819
Putative virulence/resistance : Resistance
Product : Copper-exporting P-type ATPase B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 281357 - 283429 bp
Length : 2073 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGAACACGAAATGATGACCCACGATCACATGGACCAAATGGATATGGCTCATGGCGATCACATGAATATGAACGA
TATGGATATGGACATGGGCGATGGCCATATGATGCACATGGGCAACTTAAAGCGTAAGTTCTGGGTTTCCCTGATTCTGA
CCATCCCCATTATTCTCATGTCACCAATGATGGGTGTCACCCTGCCCTTCCAGTTAACCTTTCCCGGTAGTGATTGGGTC
GTCGCCATCTTAGGCACGATTCTCTTCATTTACGGTGGTGCCCCCTTCTTCAGCGGTGCCAAGGCCGAACTCCAAATGAA
ACAACCGGCAATGATGACGCTCATCACGATGGGCGTTGGTGTGGCTTACATCTACAGTATTTATGCCGTCATCGCTAACG
ACTTATTCCATGTCACCCCGATGGTCAACAATTTCTTCTGGGAACTTTCCACTTTAATTGTCATCATGCTATTGGGACAC
TGGATTGAAATGAACACCGTCATGAATGCTGGGTCAGCTGTGGATGCCTTAGGCAAGCTACTCCCACAAACTGCCCACGT
CGTTGATGACGCTGGCACCACCCACGACGTTTCCCTAAATGACCTACAAGTTGGCCAGATAGTGGTTGTTCGTGCTGGTG
AGCAAATTCCCGCGGATGCGACGATTGTAACTGGGACCTCCGCAGTTAATGAATCCCTAGTCACTGGTGAAGCTGCTGCC
GTCAAAAAGGTTACGGGCGACCAAGTCATCGGCGGTTCCGTGAATGGCACCGGAACATTTACGGCTAAAGTCACCGGAAC
TGGTGATTCCGGTTATCTCGCTCAAGTCATGGACTTGATCCAAAATGCCAAGAATGCAAAATCAACCTCAGAAAATTTGG
CTGATCGCGTGGCTGGCTGGTTATTCTACGCCGCTTTATTCGTTGGTATTCTGGCTTTCCTCATTTGGTTAACGGTGGCC
AACCTAGCCGTGGCACTTCCCGTAGCGGTGGCCGTCTTCGTCATCGCCTGCCCGCACGCATTGGGCTTGGCTGTCCCACT
AGTTGTCGCACGGAGTACAGCACTAGCCGCTCAAAATGGCTTACTCATCCGTAATCGCAATGCCATGGAAGATGTCAAAC
ACTTAAAATTTGCGCTGATGGATAAAACGGGAACTTTGACTATGGGGCATTTTCAAGTGAACCATTTGATTAGCTTAGAC
CAAGACTACAGTGAAGAAACCATTTTACGCTTACTAGCTAGCCTGGAAAGCGGCTCTAGTCATCCACTAGCAACCGGGAT
TCTTAGCGCTGCTAAGGCACAACAAATTACCTATACAGCTGCTACTGACACGCATCAAGAAACTGGGATGGGCCAGTTTG
GTACCATCGATGACATCACTTATGGTGTCGTTGCCGTTTCCTATTTGGAGCAACACCACTTAACTTACGATCAAGCCCAA
TTCAAGACCTTAGCCGCTGAAGGCAATTCACTCAGCTATCTCGTCACAGGTGACCGGGTCTTGGGGTTAGTCGCTGAAGG
TGATCAGATCAAACCAAACGCCCAGCACCTCGTCAGTGAATTAAAGCGCCAAGGGATTACCCCCGTCATGCTGACGGGTG
ATAATCAAGAAACGGCGAATAAGGTCGCTCACGCTGTCGGGATTGAGGATGTACAAGCTCGCTTATTGCCAGAAGACAAG
GAACGTCTCGTTCAACAGTACCAAGCCTCTGGTAAAGTCCTCTTTATCGGCGATGGGGTCAACGATGCCCCAAGCTTGGC
CCGAGCAGATATCGGGATGGCAATTGGCTCTGGTACCGATGTCGCGATTGAATCGGCAGACATTATCTTAGTCGCCAGTG
ATCCAGCCGACGTCATTCAATTCCTAGACTTAGCGCGCGCGACGACACGGAAGATGACCGAAAACCTCTGGTGGGGAGCT
GGCTACAACTTAATCGCGATTCCACTGGCAGCTGGGATCTTAGCCCCCATTGGTTTCATGCTTGATCCCATGGTTGGTGC
CGTCATCATGTCACTTAGCACCGTGATTGTGGCAATTAACGCGATGACCTTAAAACTCAAACCTGTCAAATAA

Protein sequence :
MKEHEMMTHDHMDQMDMAHGDHMNMNDMDMDMGDGHMMHMGNLKRKFWVSLILTIPIILMSPMMGVTLPFQLTFPGSDWV
VAILGTILFIYGGAPFFSGAKAELQMKQPAMMTLITMGVGVAYIYSIYAVIANDLFHVTPMVNNFFWELSTLIVIMLLGH
WIEMNTVMNAGSAVDALGKLLPQTAHVVDDAGTTHDVSLNDLQVGQIVVVRAGEQIPADATIVTGTSAVNESLVTGEAAA
VKKVTGDQVIGGSVNGTGTFTAKVTGTGDSGYLAQVMDLIQNAKNAKSTSENLADRVAGWLFYAALFVGILAFLIWLTVA
NLAVALPVAVAVFVIACPHALGLAVPLVVARSTALAAQNGLLIRNRNAMEDVKHLKFALMDKTGTLTMGHFQVNHLISLD
QDYSEETILRLLASLESGSSHPLATGILSAAKAQQITYTAATDTHQETGMGQFGTIDDITYGVVAVSYLEQHHLTYDQAQ
FKTLAAEGNSLSYLVTGDRVLGLVAEGDQIKPNAQHLVSELKRQGITPVMLTGDNQETANKVAHAVGIEDVQARLLPEDK
ERLVQQYQASGKVLFIGDGVNDAPSLARADIGMAIGSGTDVAIESADIILVASDPADVIQFLDLARATTRKMTENLWWGA
GYNLIAIPLAAGILAPIGFMLDPMVGAVIMSLSTVIVAINAMTLKLKPVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 1e-128 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LVISKB_0274 YP_007653114.1 Copper-exporting P-type ATPase B BAC0079 Protein 1e-163 56
LVISKB_0274 YP_007653114.1 Copper-exporting P-type ATPase B BAC0383 Protein 4e-133 49
LVISKB_0274 YP_007653114.1 Copper-exporting P-type ATPase B BAC0629 Protein 4e-113 45