Gene Information

Name : LVISKB_0186 (LVISKB_0186)
Accession : YP_007653026.1
Strain : Lactobacillus brevis KB290
Genome accession: NC_020819
Putative virulence/resistance : Unknown
Product : D-xylose-proton symporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 190867 - 192240 bp
Length : 1374 bp
Strand : +
Note : -

DNA sequence :
ATGCGAAAAGTTTCGACCGGATTTGTTTATTTCTTCGGCGCCCTTGGTGGGTTACTCTTCGGGTATGACACCGGGGTTAT
TTCTGGAGCCATTCTGTTTATTCAGAAGCAAATGAATTTAGGGTCTTGGCAACAAGGCTGGGTGGTTAGTGCGGTTTTGT
TAGGCGCAATCTTAGGTGCTGCCATCATTGGGCCTTCGTCCGACCGGTTTGGTCGGCGGAAATTATTACTGCTTTCTGCT
ATTATTTTCTTCGTTGGGGCCTTGGGCTCTGCCTTTTCACCAGAGTTTTGGACGTTGATCATTTCCCGGATTATCTTGGG
GATGGCTGTTGGGGCTGCTTCGGCCTTGATTCCAACGTATTTGGCGGAGTTATCACCAGCTGACAAACGGGGAACGGTTT
CCAGCTTGTTCCAATTAATGGTTATGACAGGGATTCTCTTGGCATACATTACCAACTATAGCTTCTCTGGTTTCTATACG
GGTTGGCGTTGGATGTTAGGGTTTGCAGCCATTCCTGCTGCCTTATTGTTCTTAGGTGGGCTGATTTTACCTGAAAGTCC
CCGGTTCTTGGTTAAGAGTGGGCATTTAGATGAAGCTCGTCACGTGTTAGATACGATGAATAAGCATGATCAAACGGCTG
TAAATAAAGAACTAACCGATATTCAAGAATCCGCTAAAATCGTGAGTGGCGGTTGGTCCGAATTATTTGGCAAGATGGTT
CGACCTTCACTGATCATCGGGATTGGTTTAGCCATTTTCCAACAGGTGATGGGCTGCAACACGGTACTGTACTACGCACC
AACCATCTTCACGGATGTTGGCTTCGGGGTTTCAGCTGCACTGTTAGCGCATATTGGAATTGGGATCTTTAACGTGATTG
TGACCGCGATTGCGGTAGCCATCATGGATAAGATTGACCGGAAAAAGATGCTAAATATCGGTGCCGTTGGAATGGGGATC
TCCCTGTTTATCATGAGCATCGGGATGAAGTTCTCAGGTGGGTCACAGACCGCGGCGATCATCTCTGTGATTGCTTTGAC
AGTTTACATCGCCTTCTTCTCCGCAACTTGGGGTCCCGTAATGTGGGTCATGATTGGGGAAGTCTTCCCATTGAACATTC
GGGGCTTAGGTAACTCCTTTGCTAGTGTGATCAACTGGACAGCGAACATGATTGTTTCCTTGACGTTCCCATCTCTATTG
GACTTCTTCGGAACCGGGAGCTTGTTCATTGGTTACGGGATTCTCTGTTTTGCTTCCATTTGGTTCGTCCAAAAGAAAGT
GTTCGAAACTCGGAACCGGTCTTTGGAAGATATCGAAGCCACCTTACGTGCTAAGACAGGCGAAGATGCTGCTGAATTAA
GTACGACAAAATAA

Protein sequence :
MRKVSTGFVYFFGALGGLLFGYDTGVISGAILFIQKQMNLGSWQQGWVVSAVLLGAILGAAIIGPSSDRFGRRKLLLLSA
IIFFVGALGSAFSPEFWTLIISRIILGMAVGAASALIPTYLAELSPADKRGTVSSLFQLMVMTGILLAYITNYSFSGFYT
GWRWMLGFAAIPAALLFLGGLILPESPRFLVKSGHLDEARHVLDTMNKHDQTAVNKELTDIQESAKIVSGGWSELFGKMV
RPSLIIGIGLAIFQQVMGCNTVLYYAPTIFTDVGFGVSAALLAHIGIGIFNVIVTAIAVAIMDKIDRKKMLNIGAVGMGI
SLFIMSIGMKFSGGSQTAAIISVIALTVYIAFFSATWGPVMWVMIGEVFPLNIRGLGNSFASVINWTANMIVSLTFPSLL
DFFGTGSLFIGYGILCFASIWFVQKKVFETRNRSLEDIEATLRAKTGEDAAELSTTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0071 YP_251986.1 hypothetical protein Not tested SCCmec Protein 8e-69 43