Gene Information

Name : LVISKB_0184 (LVISKB_0184)
Accession : YP_007653024.1
Strain : Lactobacillus brevis KB290
Genome accession: NC_020819
Putative virulence/resistance : Unknown
Product : Xylose isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 187694 - 189043 bp
Length : 1350 bp
Strand : +
Note : -

DNA sequence :
ATGACTGAAGAATACTGGAAAGGCGTCGACAAGATTCAATACGTCGGCCATCAAGATAAGAAATCTGGTTTAGGATTCCA
ATACTACAACCCAGAAGAAGAAATTATGGGTAAGAAAATGAAGGATTGGTTACGGTTTGCCGTTGCTTACTGGCACACCT
TTGACCAACGCCTAGTTGATCCATTCGGTGATGGAACCGCTCAACGTCCTTATGACAAGTATACTGATCCAATGGACTTG
GCTTTAGCCAAGGTTGATGCTGCCTTTGAATTTTATCAAAAATTAGGGGTAGATTACCTTTGCTTCCACGATCGTGACTT
AGCTCCAGAAGGTGATACGTTACGCGAAACGAACGCCAACTTGGACAAAGTTGTTGACAAGATCGTTGAATACCAAAAGA
CTTCTGGTATGAAGGTTCTTTGGAACACGTCAAACATGTTCACTAACCCTCGGTTCGTTGAAGGGGCTGCAACCTCACCA
TACGCCGATGTCTTTGCTTACAGTGCCGCACAATTGAAGCACAGTTTGGAAATTGGTAAGCGGGTTGGCTCTGAAAACTA
TGTCTTCTGGGGTGGCCGTGAAGGTTACGAATCACTCTGGAACACCAACATGAAGCAAGAACAAGAACACGCAGCTAAGA
TTTTCCATATGGCTAAGGACTACGCTAACGAAATCGGCTTCGATGCTCAGATGTTGCTGGAACCAAAGCCTAAGGAACCA
ACGACTCACCAATATGACTTTGATGCCGCTACGACGATTGCCTTCATGAAGGAATACGACTTGGATAAAGACTTCAAGTT
GAACTTGGAAGGTAACCACGCTAACTTGGCAGGTCACACTTACCAACACGAAATCCGGGTTGCTCGTGAAGCTGGTTTGT
TAGGTTCATTGGATGCTAACCAAGGTGATAAGTTAATTGGCTGGGATATTGATGAATACCCATCAAACTTATACGAAACG
ACCGCTGCAATGTATGAAGTTGTCGAAAACGGCAGCATTGGCCCTCGCGGTGGGTTGAACTTTGATGCTAAGCCTCGTCG
TTCCTCATTTGCCCCAGAAGACCTCTTCTTAGGCCACATTGTTGGAATGGATAGCTTTGCTGCTGGACTCCGGGTTGCTG
CTGCAATGAAGCAAGATGGCTTCTTAGATAGCTTGAAGGCCGACCGTTACAGCTCATACAAGTCTGGTGTTGGTGCTGAT
ATCGAAAGTGGCAAGGCTGACTTGAAGTCCCTTGAAGCTTACGCTATCGACAAGCCACAATCAGAATTGATCGCGGCAAC
GCATTCTGATCACTTAGAAGAAATTAAGGATACGATCAACCATTACATCATCGATACGTTGAGCAAGTAA

Protein sequence :
MTEEYWKGVDKIQYVGHQDKKSGLGFQYYNPEEEIMGKKMKDWLRFAVAYWHTFDQRLVDPFGDGTAQRPYDKYTDPMDL
ALAKVDAAFEFYQKLGVDYLCFHDRDLAPEGDTLRETNANLDKVVDKIVEYQKTSGMKVLWNTSNMFTNPRFVEGAATSP
YADVFAYSAAQLKHSLEIGKRVGSENYVFWGGREGYESLWNTNMKQEQEHAAKIFHMAKDYANEIGFDAQMLLEPKPKEP
TTHQYDFDAATTIAFMKEYDLDKDFKLNLEGNHANLAGHTYQHEIRVAREAGLLGSLDANQGDKLIGWDIDEYPSNLYET
TAAMYEVVENGSIGPRGGLNFDAKPRRSSFAPEDLFLGHIVGMDSFAAGLRVAAAMKQDGFLDSLKADRYSSYKSGVGAD
IESGKADLKSLEAYAIDKPQSELIAATHSDHLEEIKDTINHYIIDTLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 6e-113 55
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 4e-113 55