Gene Information

Name : LVISKB_1092 (LVISKB_1092)
Accession : YP_007653932.1
Strain : Lactobacillus brevis KB290
Genome accession: NC_020819
Putative virulence/resistance : Unknown
Product : putative transport permease yfiN
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1105401 - 1106579 bp
Length : 1179 bp
Strand : +
Note : -

DNA sequence :
ATGAGAACCATTGCGATTATGAACCGAGTGCTAAAAGAATTATTTCGGGATAAACGAACGCTGGCGTTAATGTTTGTGGC
ACCCATCCTAATTATGTTGTTGATGAGCGTGATCTTTAATACCAATTCGACCACTGATGTTAATGTAGCCACCGTTTCTG
TCTCATCGAAGCTTAATGAAGAACTGGGAAGCCTGAAACACGTTACCGTTAAGAGCTATGATACTAAAGCAGACGCGAAA
CACGCGTTGAACCAAGAAACGGTGGATGCTATCGTTCAAAAGTCGGGAAAGAACTATGATCTGACCTATGCCAATACCGA
TTCAAGTAAGACGACTGCTGTTAAGCTGGCATTCAAAAATGCCTTAACGGCAACCAGTATTTCACAATTGAAATCGGCGC
TTAAGCAAAGCACAACGGCGATGGCAAAACTGCAAACACAACTGGCGCTGGCTCAAAAAGCAGCTAATGGTCCGACAGCG
TCAGTCACCAACCACGCGAACGCGGTGACGCCGAAAACCAGTCAGTTCAATAGTGCACCAAAGGTAACGAACCACTACGT
TTATGGTGATCAGGACACCGGGTATTTTGCTAAAATGTTGCCAATTTTGATGGGCTTCTTCGTTTTCTTCTTTGTTTTCC
TAATTTCGGGAATGGCGCTGTTAAAAGAACGAACGACAGGGACGCTCGATCGACTGCTGGCAACTCCCGTGAAACGATCG
TCGATTGTCTTTGGGTATATGCTGAGTTACGGTATTCTAGCTATTCTGCAAACGGTACTGATTGTGCTGGTAACGGTTTG
GTTGCTGGGGATTGAAGTCGTCGGCAGCTTGGTGAGCGTGGTGTTAATCAACCTCTTGTTGGCACTAGTCGCTTTAGCTT
TTGGGATCTTATTATCAACATTTGCCAACTCTGAATTTCAAATGATGCAGTTCATCCCGTTGGTGGTGGTTCCCCAGGTC
TTTTTCTCCGGAATCATTCCCTTAGATTCAATGGCTGATTGGGTCAAAGACATTTCCTACATTATTCCGCTTAAATACTC
GGGGGACGCCGTTAACGAGATTATTATGCGGGGTACCTCAATCTTTAACCTCGGTGGTGATATTGCTGTTTTACTGGGAT
TTTTGATTGTCCTAACGGTTTTAAACATCGTGGGGCTGCGGCGCTACCGGAAAGTTTAA

Protein sequence :
MRTIAIMNRVLKELFRDKRTLALMFVAPILIMLLMSVIFNTNSTTDVNVATVSVSSKLNEELGSLKHVTVKSYDTKADAK
HALNQETVDAIVQKSGKNYDLTYANTDSSKTTAVKLAFKNALTATSISQLKSALKQSTTAMAKLQTQLALAQKAANGPTA
SVTNHANAVTPKTSQFNSAPKVTNHYVYGDQDTGYFAKMLPILMGFFVFFFVFLISGMALLKERTTGTLDRLLATPVKRS
SIVFGYMLSYGILAILQTVLIVLVTVWLLGIEVVGSLVSVVLINLLLALVALAFGILLSTFANSEFQMMQFIPLVVVPQV
FFSGIIPLDSMADWVKDISYIIPLKYSGDAVNEIIMRGTSIFNLGGDIAVLLGFLIVLTVLNIVGLRRYRKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0082 YP_251997.1 hypothetical protein Not tested SCCmec Protein 5e-62 49
SE0095 NP_763650.1 hypothetical protein Not tested SCCpbp4 Protein 6e-62 48
SH2614 YP_254529.1 hypothetical protein Not tested ¥ðSh2 Protein 2e-58 44