Gene Information

Name : LVISKB_1065 (LVISKB_1065)
Accession : YP_007653905.1
Strain : Lactobacillus brevis KB290
Genome accession: NC_020819
Putative virulence/resistance : Unknown
Product : Catalase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1082684 - 1084150 bp
Length : 1467 bp
Strand : +
Note : -

DNA sequence :
ATGCGTGAAGATTTAAAAAACTCAGCGGGCCAACCGTGGGGAGACAATGAACACTCTCTAACGGCCGGACAACGCGGGCC
TGTTCTCATACAAGATTATAATTTATTGGAAAAGTTGGCGCACTTTAACCGCGAACGGATTCCAGAACGAGTGGTTCATG
CCAAAGGTGCCGGTGCGGAAGGTACTTTTCGACTAACTAAAGATATGCATCAATATACCAAAGCCAAGATTTTTACTGAG
ATGGGGAAATCAGTTCCCATGCGGATTCGCTTTTCTCAAGTGGCCGGAGAAATGGGTTCAGCAGATACAGTTAGAGATGT
CCGGGGGTTTGCACTCCGGTTTTACACAGATGATGGGAATTACGACATCGTGGGAAATAATACACCGGTATTCTTTGTCA
ATGACCCATTGAAGTTTCCAGATTTTATTCATTCACAAAAGCGTGATCCACGAACACACGAGCGTTCACAAGATATGCAA
TGGGACTTCTGGGCCCACTCACCCGAATCGGTTCACCAAGTCACGATTCTGATGAGTGATCGGGGGATTCCGGCTTCCTA
CCGTAAGATGCATGGTTATGGGTCTCACACATTCAAATGGGTGAATGAAGCGGGTGAAGTCTTTTGGGTGAAGTATCATT
TCCGGACGGCTCAAGGCATTCAGAACTTATCCAACGATGTCGCTCAGCGTCTAGCCGGAGAGAACCCCGATTACCTGCAA
GCTGATTTATATCACGCGATTGAAGCCGGCGATTTTCCAACCTGGAAAGTTTGTGTACAGGTGATTCCTGAACAGGCAGG
TCTCGATTATCCAGCTGACATTTTTGATGTGACGCAAGTTGTTTCTCAAAAAGATTATCCGTTGATTGAGATTGGTGAGT
TCACACTAAATAAAAATCCTGATAATTACTTTGAAGGTGTTGAGGAAGCTGCCTTTTCACCGGCTAATTTGGTACCCGGA
ATTGAACCTTCTCCCGATAAGTTATTGCAGGGTCGGCTGTTTGCTTATAAGGATGCAGCGCGTTACCGGTTAGGGGTTAA
CTACGAGCAGTTGCCAGCTAATCGACCACTTAATCATCCGAATAATTATGAGCGCGATGGGTTCATGCAAACGGATAATC
ACGGGGATCAAGTTAACTATGAACCGAATAGTCAGGGGGGCCCGCAAGAAGATCCTGCTGGTCGGCTGACACCATACACT
GTTTCTGGAAAGGCCGGTAACTATGCCTATCAAACAGATTATGGTCGGGCCGCTGGAAAACTTTACCGTTTGTTACCAGC
CGATGAACGACAACGGTTAATTGAAACCATTGTCATGAATCTGGGACAAGTTAAGAGCCATGACGTTAAGCGATTAGAGA
CGGCTCAGTTCTATGAAGCAGATCATGATTATGGGTTGGCAGTTGCCAAAGGGCTGGGCCTAAAATTAGATGAAATTAAG
GACTACCCATTTGATACAACGCACTAG

Protein sequence :
MREDLKNSAGQPWGDNEHSLTAGQRGPVLIQDYNLLEKLAHFNRERIPERVVHAKGAGAEGTFRLTKDMHQYTKAKIFTE
MGKSVPMRIRFSQVAGEMGSADTVRDVRGFALRFYTDDGNYDIVGNNTPVFFVNDPLKFPDFIHSQKRDPRTHERSQDMQ
WDFWAHSPESVHQVTILMSDRGIPASYRKMHGYGSHTFKWVNEAGEVFWVKYHFRTAQGIQNLSNDVAQRLAGENPDYLQ
ADLYHAIEAGDFPTWKVCVQVIPEQAGLDYPADIFDVTQVVSQKDYPLIEIGEFTLNKNPDNYFEGVEEAAFSPANLVPG
IEPSPDKLLQGRLFAYKDAARYRLGVNYEQLPANRPLNHPNNYERDGFMQTDNHGDQVNYEPNSQGGPQEDPAGRLTPYT
VSGKAGNYAYQTDYGRAAGKLYRLLPADERQRLIETIVMNLGQVKSHDVKRLETAQFYEADHDYGLAVAKGLGLKLDEIK
DYPFDTTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA YP_005126717.1 catalase Not tested Not named Protein 1e-98 57
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 1e-94 56
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 1e-94 56
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 1e-94 56
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 1e-94 56
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 3e-107 52