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Name : tra5 (XCAW_00992) Accession : YP_007649003.1 Strain : Xanthomonas citri Aw12879 Genome accession: NC_020815 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1142271 - 1143113 bp Length : 843 bp Strand : - Note : - DNA sequence : ATGCAAGTCCACCGCGAAGAATTCAGGGTGTGCGCGATGTGCCGGGTTTTGCGGGTGAACCGGGCTGGATACTACGCGTG GCTAAAGTCGCCCGACAGTGAACGCGCCAAGGAAGACGAACGCCTGCTGGGGCTGATCAAGCACCACTGGTTGGCCAGCG GCAGTGTCTATGGGCATCGCAAGATTGCCAAGGATCTACGCGATCTGGGTGAGCGTTGCAGTCGCCATCGGGTGCATCGA TTGATGCGCACCGAGGGACTGCGTGCCCAGGTGGGCTATGGCCGCAAGCCGCGCTTCCATGGCGGAACGCCGTGCAAGGC GGCAGCCAACCTGCTGGATCGACAGTTCGACGTGACCGAGCCGGACACGGCCTGGGCGAGCGACTTCACCTTCATCCGTA CGCATGAAGGCTGGATGTACCTGGCTGTGGTGATCGATCTGTTTTCCAGGCAGGTCGTCGGCTGGGCGATGCGCGATCGA GCCGATACCGAGTTGGTCGTGCAGGCCTTGCTGTCGGCGGTGTGGCGGCGCAAACCCAGCGCTGGTTGCCTGGTTCATTC GGACCAGGGGTCTGTCTACACCAGCGATGACTGGCGCAGTTTCCTGGCGTCCCATGGCTTGGTGTGCAGCATGAGTCGGC GTGGCAACTGCCACGAGCGCGAAGCCTGCCCTTGGGGCACAACGCACCGGTGGAGAGCTTCTTTGGTCTGCTCAAACGCG AGCGGATCAGGCGGCGGATCTACCCCACCAAGGACGCCGCACGCGCCGAGGTGTTCGACTACATCGAGATGTTCTACAAC CCACAACGCCGTCATGGTTCAACTGGCGACCTGTCCCCTGTAG Protein sequence : MQVHREEFRVCAMCRVLRVNRAGYYAWLKSPDSERAKEDERLLGLIKHHWLASGSVYGHRKIAKDLRDLGERCSRHRVHR LMRTEGLRAQVGYGRKPRFHGGTPCKAAANLLDRQFDVTEPDTAWASDFTFIRTHEGWMYLAVVIDLFSRQVVGWAMRDR ADTELVVQALLSAVWRRKPSAGCLVHSDQGSVYTSDDWRSFLASHGLVCSMSRRGNCHEREACPWGTTHRWRASLVCSNA SGSGGGSTPPRTPHAPRCSTTSRCSTTHNAVMVQLATCPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orfB | AGK07051.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 3e-26 | 42 |
| VC1789 | NP_231424.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 4e-26 | 42 |
| orfB | YP_001217329.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 4e-26 | 42 |
| orfB | ACX47958.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 3e-26 | 42 |
| VPI2_0008c | ACA01825.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 3e-26 | 42 |
| orfB | AGK06910.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 3e-26 | 42 |
| overlap with orfA characteristic of IS3 family members | AGK06947.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 3e-26 | 42 |
| orfB | AGK06993.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 3e-26 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tra5 | YP_007649003.1 | transposase | VFG1122 | Protein | 2e-26 | 42 |
