Gene Information

Name : hpa1 (XCAW_00826)
Accession : YP_007648841.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Virulence
Product : Hap1 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 949590 - 950006 bp
Length : 417 bp
Strand : -
Note : -

DNA sequence :
ATGATGAATTCTTTGAACACACAGCTCGGCGCCAACTCGTCCTTCTTTCAGGTTGACCCCAGCCAGAACACGCAATCTGG
TTCGAACCAGGGCAACCAGGGCATCTCGGAAAAGCAACTGGACCAGCTGCTGACCCAGCTCATCATGGCCCTGCTTCAGC
AGAGCAACAATGCCGAGCAGGGTCAGGGTCAAGGCCAGGGTGGTGACTCTGGTGGTCAGGGCGGCAATCGGCAGCAGGCC
GGTCAGTCCAACGGCTCCCCCTCGCAATACACCCAGATGCTGATGAATATCGTCGGAGACATTCTCCAGGCGCAGAATGG
TGGTGGCTTCGGCGGCGGCTTTGGTGGTGGCTTCGGCGGCGGCCTCGGCACCAGCCTCGGCACCAGCCTTGCGAGCGACA
CCGGATCGATGCAGTAA

Protein sequence :
MMNSLNTQLGANSSFFQVDPSQNTQSGSNQGNQGISEKQLDQLLTQLIMALLQQSNNAEQGQGQGQGGDSGGQGGNRQQA
GQSNGSPSQYTQMLMNIVGDILQAQNGGGFGGGFGGGFGGGLGTSLGTSLASDTGSMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpa1 NP_640771.1 Hpa1 protein Virulence Hrp PAI Protein 3e-16 100
hpaG AAP34334.1 HpaG Virulence Hrp PAI Protein 2e-15 95
ORF1 BAB07848.1 Hpa1 homolog Not tested Hrp PAI Protein 5e-07 61
hpa1 AAC95121.2 Hpa1 Not tested Hrp PAI Protein 5e-07 61
hpa1 YP_198734.1 protein Hpa1 Virulence Hrp PAI Protein 7e-07 61
xopA AAL78294.1 XopA Virulence Hrp PAI Protein 2e-05 47
xopA YP_362171.1 outer protein A Virulence Hrp PAI Protein 3e-05 47