Gene Information

Name : hrpB5 (XCAW_00821)
Accession : YP_007648836.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Virulence
Product : HrpB5 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 943619 - 944320 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence :
ATGCGTCTCTGGTTGAGGTCAACGCCCGATGCCATCGGCCTGGATTGCGATGTCATTCCGCGCGAGGCGCTGGCCTCGGT
GCTGGCGCTGGATGCTGCCACTGCCGAGGTGCACGCACGCTGCGAGCAGGCCCTGAGCCAGGCGCAGACACGTGCACAGA
CGCTGATCGACGAGGCTCAACAGCAGGCCGAGGCGATCCTTCACGATGCGCGCCAAAAGGCCGAGCGCAGCGCACGCCTG
GGATATGCAACCGGGCTGCGACGTCAGCTTGATGAGTGGAACGAATCCGGCCTGCGCCATGCCTTTGCCGCCGACACGGC
CGCGCAGCGGGCACGCGAGCGCCTGGCTGAGATTGTCGCGCGCACCTGCGAGCACATCATCCTCGGACACGACCCTGCGG
CGCTGTATGCGCGTGCGGCGCAGGCCTTGGAAGGTGCCCTGGACGAGGCCAAGGCCCTGCGCGTGAGCGTGCACCCCGAC
GCGGTGGACGCTGCGCGGCGCGCCTTCGACGCGACCGCCACCGAGGCGGGCTGGACCCTGCAGGTAGAGCTGTGCGGCGA
TGCCGATCTGGCCGTGGGCGCCTGCGTGTGCGAGTGGGATACGGGAGTGTTCGAGACCGATCTGCGCGACCAGCTGCGCA
GTCTGCGGCGCGTCATTCGCCGCGTGTTGGCCGCACCCCAGGAGCCCGTGGATGCTGGCTGA

Protein sequence :
MRLWLRSTPDAIGLDCDVIPREALASVLALDAATAEVHARCEQALSQAQTRAQTLIDEAQQQAEAILHDARQKAERSARL
GYATGLRRQLDEWNESGLRHAFAADTAAQRARERLAEIVARTCEHIILGHDPAALYARAAQALEGALDEAKALRVSVHPD
AVDAARRAFDATATEAGWTLQVELCGDADLAVGACVCEWDTGVFETDLRDQLRSLRRVIRRVLAAPQEPVDAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB5 NP_640766.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 2e-66 100
hrpB5 AAP34340.1 HrpB5 Virulence Hrp PAI Protein 2e-66 100
hrcL YP_362162.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 1e-63 97
hrpB5 AAB08460.1 HrpB5 Virulence Hrp PAI Protein 1e-63 97
hrpB5 BAB07853.1 HrpB5 Virulence Hrp PAI Protein 1e-63 94
hrpB5 AAF61282.1 HrpB5 Virulence Hrp PAI Protein 1e-63 94
hrpB5 YP_198729.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 2e-63 94
XC_3007 YP_244075.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 4e-50 78
hrpB5 NP_636609.1 type III secretion system protein HrpB Virulence Hrp PAI Protein 3e-50 78