|
Name : hrpF (XCAW_00802) Accession : YP_007648817.1 Strain : Xanthomonas citri Aw12879 Genome accession: NC_020815 Putative virulence/resistance : Virulence Product : HrpF protein Function : - COG functional category : - COG ID : - EC number : - Position : 927818 - 930211 bp Length : 2394 bp Strand : - Note : - DNA sequence : ATGTCGCTCAATACACTTTCTACCGGGAGCAACCCCAGCCAATTGCTGGGCACTCCTCTAAACGAGTCCGATTCGTCGGA GCTGTTGGGGTCGGATTCGTCCAAGGATGACTCCGATCTGCCGTCGACGATGGACGACATCTTTCTGCTGATCTACCAGC TGCTGGCAGCCCTCCAAACCAACGCGCCAACGAGTACATCAGGCAATGGGTCGGCCGATGCACCAACAAGCGCGCCAAGC GGCGATGCCAGCACCCCGTCTTCTGCATCGGACGATCAAGCCAACCAGCCGATCGAGAAGCGCACCTCGTGGCCATCGCT GGGCTACGACTTCGATCCCAAGGACATCAAGGGTAAGGACGCGCCACCAGCATTGGAGGGCTCAACGGTCACCTGGAACG GTGGCACGCTCACACCATCGGAGCTGCAGATCGTTTCGACCTTGAATGCCCACAAGGATCAGATGCCGCTCGAATACAAG AATCTCGATGACAAGATCAACGACCCTTCCACGCCCGCCGACCTGAAGGCCGCATTGCAGGGACTGAAGCAGGACCCGCG CTTGTTCTTTGCGATCGGTTCGCAGGGAGACGGCAAGTGCGGCGGCAAGATCAAGGCGCAGGATCTCTGGGATTTCTCCG ATTCGCATCCGCAGGTCAAGGCGATGGGCGGGAAGAACGACCAGTTCAACCCCAAGGACATCAAGGGATCGACGCCACCT CCCGCCGTCGATGGCTCATCGGTCACCTGGGATGGTGGAACGCTCACCCAGAATGAGCTGGAAATCGTCAGTACGCTCAA TCGCCATAAGGATCAGTGCCCACTCAAGTGGTCCGATCTGGATGCAAAGATCAACGACCCGTCGACACCACCGGATCTGA AGAAGGCATTGACGGACTTGCAGTCGGACCCGCGGCTGTTCTTCGCGATCGGCTCGCAAGGTGATGGCAAGTGCGGCGGC AAGATCAAAGACGGCGATCTCGGCAAGTTCGTCTCCCACCATGCGCAGGTCGCCGAGTACGCCGACAAGCAAGCAAAGAA CTACACACAGAACTACGTGGCCTCGGACAGCCCGGACAAGACCAAGGCGTCGGTAATGAACGAGAGCGATGCCATGCGTG AGCTGTACCGCTATTCGGACTATCTGCCGGACGATCTGAATCAGGATACCTTCAAGTCTCTGGTGGATGGCGAAAGCAGC ACCAAGAAATGTCCGCCGCAGGTCATCGCTGCCGCACAGTATTTTCGTGATCATCCCGACCAGTGGAAAGCGCTGGCAGG AGACTCCGGCTCGATGAGCAAACCGGACTTCCTGCAGAAAGCCAGCTCCGAGATTCACCTGACGGCGGACGAGCAGAAGA CGCTGGACACCATCAACAGTCATCAAGACGCTTTTTACGGCGATGGCAAGGAAGTGACCCGCGACAAGCTCGACTCCATT TCCAAGGACGACAAGGCCGACCCCGCGGTGAAAGAGGCCGCGACGCAGTTGTTGAACGATCCGTTGCTGTTCGGGTTGTT GAACAACTCGATCACCGGCTACAAGAAGCCACATCGCTTCTTCGGGGGTGGTCATGTCGTCGACTCGGGCAAGATCAGCC AGGACGATTTCCGGCGGTTCTACGACAACATGAGCGCAGCCAACAAGACCGTGGACAAGCCGGTCACGCACGATGCCAGC TCGGCCGAGCAGCAAAAGGCCGTCTCGGACATGCTGATGGGCAAGGACGATCCGCCCGCGATCAAGAAGCCCAAAAAAGA CGTCGGCGTGTTCCAGGAGGGCTTGCACGAGTTCCTCAAGTGGGACAGCAAGATCCTGGACTGGATGTCCGTTGGCCTCA GCGCATTGAATGGGATTCCCATCATCGGCGAAATTACCGATGCGGCGTCGATTGCATTGGAAAGCGAGGCGCAGGCGGCG CAGGTGGTCGACACCGCGATTCAAGGTGGCGACATGTCGCTTGCCTTGAAGCTGGCCGGCATCAATATGGCCGGAGCAGT GGTTGGAGCAGTCGGCGGACCCACGGCCAGAATCGGAGCCAAGGCGGTCGCCAAGGGAGTCGCCGAAGCCGCGGCCAAGG GAACTGCCAAGGGCGTGGCCAAAGGTGCGGGTAGAACGGCGGCCGAACGGCCGAGCGCCGCGGAGTTCGCAAAAGGCTAT GTCGGCGGCACTGCCATCAGTAAATCGGTTGAAATTCTCAAGACGCCCGTCTTGGCGGGCTTGCATTACGAAGAATATCG ACTGGACAAGCAGAAAGAAGGAGAGATCCACCAGAAGATGGAAAACGCCGGCGGCATCCCGATGGGTAAGCAGATTGTTC CCACGAACGTTGCCAACAATTTCGAGGGAGACCTGCGACAGAACCTGAGGAATATCAGAGTGCGTCGTAGATAA Protein sequence : MSLNTLSTGSNPSQLLGTPLNESDSSELLGSDSSKDDSDLPSTMDDIFLLIYQLLAALQTNAPTSTSGNGSADAPTSAPS GDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYK NLDDKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALTDLQSDPRLFFAIGSQGDGKCGG KIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESS TKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDSI SKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFGGGHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDAS SAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAA QVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARIGAKAVAKGVAEAAAKGTAKGVAKGAGRTAAERPSAAEFAKGY VGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENAGGIPMGKQIVPTNVANNFEGDLRQNLRNIRVRRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpF | NP_640749.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrpF | AAP34358.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 98 |
| hrpF | YP_362142.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 84 |
| hrpF | AAB86527.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 84 |
| hrpF | BAB07869.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 81 |
| hrpF | YP_198705.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 81 |
| XC_3025 | YP_244093.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 69 |
| hrpF | NP_636591.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 69 |
