Gene Information

Name : glnA (XCAW_00601)
Accession : YP_007648618.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Virulence
Product : Glutamine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 711815 - 713224 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGTGGAAAATGTTGAAAAGCTGATCAAGGACAACAAGGTCGAGTTCGTCGACCTGCGCTTCGTCGATATGCGTGG
TGTACAGCAGCACATCACCTTTCCGGTCAATATCATCGAGCCGGCGCTGTTTGAAGAAGGCAAGATGTTCGACGGCAGTT
CGATCGCGGGCTGGAAGGGCATCAACGAGTCGGACATGGTGTTGCTGCCGGACGCCGGTACCGCGTATCTGGATCCGTTC
TTCGCCGATCCGACCATCGTGCTGACCTGCGACATCCTCGACCCGGCCACCATGCAGAGCTATGAGCGCGATCCGCGCGG
CATCGCCAAGCGCGCCGAGGCCTATCTGAAATCCTCCGGCACCGCCGACCAGGCGTTCTTCGGCCCGGAGCCGGAATTCT
TCATCTTCGATTCGGTGCGCTTTGCCAACGACATGGGCCACACCTTCTTCCAGGTGGGTTCGGAAGAAGCGGCCTGGAAC
ACCGGCGAAAAGTACGACGGCGGCAACAGCGGTTACCGCCCGGGCGTGAAGGGCGGCTACTTCCCGGTTCCGCCGACCGA
CAGCCTGCACGACCTGCGCGCGGAAATGATCAAGACGCTGGAACAGGTCGGCATCGAAACCGAAGTGCACCACCACGAAG
TGGCCACCGCCGGCCAGTGCGAGATCGGCACCAAGTTCAGCTCGCTGGTGCAGAAGGCCGACGAACTGCTGACGATGAAG
TACATCATCAAGAACGTCGCCTACCGCAACGGCAAGACCGCCACCTTCATGCCCAAGCCCATCGTGGGCGACAACGGCTC
GGGCATGCACGTGCACCAGTCGCTGGCCAAGGGCGGCGTCAACCTGTTCACCGGCGACGGCTACGGCGGCCTGTCGCAGC
TGGCGCTGTGGTACATCGGCGGCATCTTCAAGCATGCCCGCGCGATCAACGCCTTCGCCAACTCCGGCACCAACAGCTAC
AAGCGTCTGGTCCCGGGCTTCGAGGCGCCGGTGATGCTGGCCTATTCGGCGCGTAACCGTTCGGCGTCGTGCCGCATTCC
CTGGGTCACCAATCCGAAGGCGCGCCGCATCGAAATGCGCTTCCCCGATCCGTTGCAGTCCGGCTACCTGACCTTCACCG
CGCTGATGATGGCCGGCCTGGACGGCATCAAGAACCAGATCGATCCGGGCGCACCGAGCGACAAGGACCTGTACGACCTG
CCGCCGGAAGAAGAGAAGCTGATCCCGCAGGTTTGCTCCAGCCTGGACCAGGCGCTGGAAGCGCTGGACAAGGACCGCGA
GTTCCTTAAGGCCGGCGGCGTGATGAGCGACGACTTCATCGACGGCTATATCGCGCTGAAGATGCAGGAAGTCACCAAGT
TCCGTGCTGCGACCCACCCGTTGGAGTACCAGCTGTACTACGGCAACTGA

Protein sequence :
MSVENVEKLIKDNKVEFVDLRFVDMRGVQQHITFPVNIIEPALFEEGKMFDGSSIAGWKGINESDMVLLPDAGTAYLDPF
FADPTIVLTCDILDPATMQSYERDPRGIAKRAEAYLKSSGTADQAFFGPEPEFFIFDSVRFANDMGHTFFQVGSEEAAWN
TGEKYDGGNSGYRPGVKGGYFPVPPTDSLHDLRAEMIKTLEQVGIETEVHHHEVATAGQCEIGTKFSSLVQKADELLTMK
YIIKNVAYRNGKTATFMPKPIVGDNGSGMHVHQSLAKGGVNLFTGDGYGGLSQLALWYIGGIFKHARAINAFANSGTNSY
KRLVPGFEAPVMLAYSARNRSASCRIPWVTNPKARRIEMRFPDPLQSGYLTFTALMMAGLDGIKNQIDPGAPSDKDLYDL
PPEEEKLIPQVCSSLDQALEALDKDREFLKAGGVMSDDFIDGYIALKMQEVTKFRAATHPLEYQLYYGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-106 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_007648618.1 Glutamine synthase VFG1399 Protein 2e-108 51