Gene Information

Name : aldA (XCAW_00518)
Accession : YP_007648535.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Virulence
Product : Chloroacetaldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 613473 - 615002 bp
Length : 1530 bp
Strand : +
Note : -

DNA sequence :
ATGAACGCGCTTGCCTCTGCAAAATCGCTCAACAACGATCCGCACTCCATCTTCAAACCGCGCTACGACAACTTCATCGG
CGGCCAGTGGGTAGCGCCGCACAGCGGCCAGTACTTCGACAACACCACGCCGATCAACGGCAAGGTCTTTACCTCGATCG
CGCGCTCCACCGCCCCGGATATCGAAGCGGCGCTGGATGCCGCGCACGCGGCCAAGGATGCGTGGGGCAAGACCTCCACC
ACCGAGCGCTCTAACGTATTGCTCAAGATCGCCGACCGCATCGAACAGAATCTCGAACTGCTCGCGTACGCCGAGACCTG
GGACAACGGCAAGCCGGTGCGCGAAACGCTCAATGCCGACGTGCCGTTATGCGTGGACCACTTCCGCTATTTCGCCGGCG
CCATCCGCGCGCAGGAAGGCGGCATTTCCGAGATCGACAGCGACACCATCGCGTATCACTTCCACGAACCACTGGGCGTG
GTGGGGCAGATCATCCCGTGGAATTTCCCGCTGCTGATGGCGTGCTGGAAACTCGCACCGGCGCTTGCCGCCGGTAACTG
CGTGGTGATGAAGCCGGCAGAGCAGACGCCTGCCTCGATCCTGGTGTTGATGGAACTCATCGGCGACCTGCTGCCGCCTG
GCGTGTTGAACGTGGTCAACGGCTTCGGCCTGGAGGCCGGCAAGCCGCTGGCCAGCAACCCGCGCATCGCCAAGATTGCG
TTCACCGGCGAAACCACCACCGGCCGGCTGATCATGCAGTACGCCAGCCAGAACCTGATTCCGGTGACGCTGGAGCTGGG
TGGCAAATCGCCCAACATCTTCTTCGCCGATGTGATGGCCGAAGACGACGATTTTCTCGACAAGGCGGTGGAAGGCTTCG
TGCTGTTCGCTTTCAACCAGGGCGAAGTGTGTACCTGCCCGTCGCGCGCGCTGATCCAGGAGTCCATCTACGACGCCTTC
ATGGAAAAGGCGCTCTCGCGCGTGGCCGCGATCAAGCAGGGCAATCCGCTCGACCCCAACACCATGGTCGGTGCGCAAGC
GTCCAGCGAACAGTTGGAAAAAATCCTCTCCTATATCGACATCGGCAAGCAGGAAGGCGCCGAAGTGTTGATTGGCGGCG
AGCGCAACACGCTCGATGGCGACCTGGCCGAAGGTTTTTACGTCAAGCCCACGGTGTTCAAGGGCCATAACAAGATGCGC
GTGTTCCAGGAGGAGATCTTCGGCCCGGTGGTCTCGGTCACCACCTTCAAGGACGAAGCCGATGCGCTGGCGATCGCCAA
CGACACGCTGTACGGCCTGGGTGCCGGTGTCTGGAGTCGCGACGCTTCGCGCCTGTATCGGATGGGCCGTGCGATCCAGG
CTGGCCGCGTGTGGACCAATTGCTATCACGCCTATCCTGCGCATGCTGCATTCGGCGGGTACAAGCAGTCGGGTATCGGC
CGCGAGAATCACAAGATGATGCTCGACCACTATCAGCAGACCAAGAACCTGTTGGTGAGCTATTCGCCGAAGGCGCTGGG
GTTTTTCTAA

Protein sequence :
MNALASAKSLNNDPHSIFKPRYDNFIGGQWVAPHSGQYFDNTTPINGKVFTSIARSTAPDIEAALDAAHAAKDAWGKTST
TERSNVLLKIADRIEQNLELLAYAETWDNGKPVRETLNADVPLCVDHFRYFAGAIRAQEGGISEIDSDTIAYHFHEPLGV
VGQIIPWNFPLLMACWKLAPALAAGNCVVMKPAEQTPASILVLMELIGDLLPPGVLNVVNGFGLEAGKPLASNPRIAKIA
FTGETTTGRLIMQYASQNLIPVTLELGGKSPNIFFADVMAEDDDFLDKAVEGFVLFAFNQGEVCTCPSRALIQESIYDAF
MEKALSRVAAIKQGNPLDPNTMVGAQASSEQLEKILSYIDIGKQEGAEVLIGGERNTLDGDLAEGFYVKPTVFKGHNKMR
VFQEEIFGPVVSVTTFKDEADALAIANDTLYGLGAGVWSRDASRLYRMGRAIQAGRVWTNCYHAYPAHAAFGGYKQSGIG
RENHKMMLDHYQQTKNLLVSYSPKALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-160 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-160 66
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-160 66
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-159 66
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-154 65
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA YP_007648535.1 Chloroacetaldehyde dehydrogenase VFG0082 Protein 4e-154 65