Gene Information

Name : XCAW_04503 (XCAW_04503)
Accession : YP_007652465.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : phage-related major capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5058298 - 5059311 bp
Length : 1014 bp
Strand : +
Note : -

DNA sequence :
ATGCAAAACGCCACCCGCCTGCAGTTCAACCAGTTCGCCGAGCAGATCGCCAAGCTCAACGGCATCACCTCCGCCTTCCA
TTCCTTCGCTGTCGATCCGACCGTTCAGCAGAAGCTGGAAACGCGCATGCAGGAGTCGAGCGAGTTCCTGTCCAAGATCA
ACATCATCCCGGTGGACGAACTGTCCGGTCAGAAGGTGGGCATCGGCGTCACCGGCAGTATCGCCAGCCGCACCGATACC
GGCGCCGGCAAGACCCGCACCCCGCGCAACGTGGCCGCACTCGACAAGAACGAGTACGTCGCCAAGAAGACCGACTTCGA
CACCGCCATTCCGTATGCGTTGCTCGACACCTGGGCCAAGTTCCCCGACTTCCAGGCGCGCCTGCGCGATGCCATCGTCA
AGCGTCAGGCGCTGGACCGTCTGCAGATCGGCTTCAACGGCACGCACGCCGCTGCCGACACCGACCGCGCCAAGTTCCCG
CTGCTGGAAGACGTCAACATCGGTTGGCTGCAGCAGTACCGCATCAACGCCGCCCAGCGCGTGCTGGCGAGCGGCAAGAC
GGCCGGCAAGGTCGTTATCGGCGGTGCCGGTGCCGACTACGGCAACCTCGACGCACTGGTGTACGACGTCGTGAGTAATC
TGCTGGACCCGTGGCACCGCAAGGATCCAAGCCTGGTGGTGGTGCTGGGCCGCGACCTGATGCACGACAAGTATTTCCCG
ATGGTCAACAAGGATCAGCCGGCCAGCGAGAAGATCGCCACCGACCTGATCTTGAGCCAGCGCCGCGTCGGCGGCCTGCA
GGTAGCCGAGGTGCCGTACCTGCCGGACGGCGCGTTGATGGTCACTTCGCTGGCGAACCTGTCGATCTACTACCAGACCG
GCGGCCGTCGCCGCTACATCCAGGAAGTGCCCGCACGCGATCGCATCGAGAACTACGAGTCCTCCAACGATGCGTACGTG
GTCGAAGACTACGGCCTGGGCTGCGTGGTGGAGCACATCGAGATCGAGGACTAA

Protein sequence :
MQNATRLQFNQFAEQIAKLNGITSAFHSFAVDPTVQQKLETRMQESSEFLSKINIIPVDELSGQKVGIGVTGSIASRTDT
GAGKTRTPRNVAALDKNEYVAKKTDFDTAIPYALLDTWAKFPDFQARLRDAIVKRQALDRLQIGFNGTHAAADTDRAKFP
LLEDVNIGWLQQYRINAAQRVLASGKTAGKVVIGGAGADYGNLDALVYDVVSNLLDPWHRKDPSLVVVLGRDLMHDKYFP
MVNKDQPASEKIATDLILSQRRVGGLQVAEVPYLPDGALMVTSLANLSIYYQTGGRRRYIQEVPARDRIENYESSNDAYV
VEDYGLGCVVEHIEIED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 5e-117 72
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 2e-77 52
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 2e-77 52