Gene Information

Name : XCAW_04502 (XCAW_04502)
Accession : YP_007652464.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : phage-related capsid scaffold protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5057409 - 5058251 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence :
ATGTCGGCCAAGGCCAAGAAGTTCCGTTCCAACTGGTTCCGCGTGGCCGTCGAAGGCGCCACCACCGATGGCCGCACGAT
CCAACGCAGCTGGATCGAAGACATGGCCGCGACCTACAACCGCGAGACCTACAACGCCCGCATCTGGATCGAGCACATGC
GCAGCCTGCTGCCGGATTCGCCATTCCGTGCGTATGGCGATGTCACTGCAGTGAAGGCCGAAGAGGTCGAGATCGACGGC
AGCAAGCGCCTGGCGCTGTTTGCCCAGATCGAGCCGACCGCCGATCTGATCACCATCAACAAGTCCAAGCAGAAGCTCTA
CACCAGCATCGAGGTGCAGGAGAAGTTCGCTAACACCGGCAAGGCGTATCTGGTCGGCCTGGCCGTGACCGATTCGCCGG
CCAGTCTGGGCACCTCCATGCTCAGCTTCGCCAGCCAGAACCCGGACGCCAATCCGCTGGCCGATCGCAAGCAGTCACCG
GGCAACCTGTTCACCGTTGCCGAGGAAACCGCGCTGGAATTCAGCGAAGTCAGCGAAGGCCCGGTTGCCAATCTACTCAG
CCGGATCCGCACCGCACTCAAGAGCGAGGACGCCACCAGCATCACCGCCGAGCAGTTCGCCGACCTCGGCCAGGGCGTCG
AAGAGATCGCCGAGTACGTGCGCGGCCAGGACGAACGCTTCAACCGCCTGCAGGCCGAACACGCCGAGCAGAAGACCAAG
CACGAGCAGTTGGCAAACGACCTGGCGCAGCTGCGCGAGTCGCTGTCGCAGCAGCCGGACCCGGCACAGCCCGCAAGGCC
GGTGGTCACCGGCAGCGGCGCGGCCGTGCTGACCGACTGCTGA

Protein sequence :
MSAKAKKFRSNWFRVAVEGATTDGRTIQRSWIEDMAATYNRETYNARIWIEHMRSLLPDSPFRAYGDVTAVKAEEVEIDG
SKRLALFAQIEPTADLITINKSKQKLYTSIEVQEKFANTGKAYLVGLAVTDSPASLGTSMLSFASQNPDANPLADRKQSP
GNLFTVAEETALEFSEVSEGPVANLLSRIRTALKSEDATSITAEQFADLGQGVEEIAEYVRGQDERFNRLQAEHAEQKTK
HEQLANDLAQLRESLSQQPDPAQPARPVVTGSGAAVLTDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 2e-65 51
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 1e-45 42
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 1e-45 42