Gene Information

Name : XCAW_04500 (XCAW_04500)
Accession : YP_007652462.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Bacteriophage capsid portal protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5054481 - 5055503 bp
Length : 1023 bp
Strand : -
Note : -

DNA sequence : 
ATGTTGACCGACCAGTTGCCCGCGACCGCGCCTGCAGCGCCAGCCGTGCCTGCACGCATCGAGGCGTTCACCTTTGGTGA
CCCGACGCCGGTGCTCGATGGACGCGGCGTGCTGGACTATCTGGAGTGCTGGCAGAACGGGCGCTGGTATGAGCCGCCTG
TGGCCCTGGATGGCCTGTCCAAGACCACCCGCAGCAATCCGTTTCTGCAGTCCGGGCTGATCTTCAAGCGCAACATGCTG
GCGCGGACCTTCAAGCCGCATCGGTTACTGACGCGCGAGGCCTTCGAGCAGCTGTCGCTGGACTGGATCACCCTGGGCAA
TGGCTACCTTGAGCGTCGCCGCAACCGCATGGGCGGTGCGCTGTCGCTGGCTGCGCCGCTGTCCAAGTACATGCGGCGCG
GTATCACCGAGGGCGAGTACTTCCAAGTGCGCACCTGGCACGACGAGCACGTGTTCGAGCCGGGCAGCGTGTTCCAGCTG
CGCGAAGCCGATGTCGATCAAGAACTCTACGGCCTGCCCGAGTGGATGCCGGCGATGCAGTCCGCGCTGCTCAACGAATC
GGCCACGCTGTTCCGGCGCAAGTACTACAACAACGGCTCGCATGCCGGTTTCATTCTGTACCTGACCGACCCGCAGCAGA
GCCAGGAAGACGTGGATGCGCTGCGCAACGCCATGAAGGGCGCCAAGGGGCCGGGCAACTTCCGCAACCTGTTCCTGTAC
TCGCCAGGCGGCAACAAGGATGGCTTGAAGCTGATCCCGGTCAGCGAAGTGGCGGCCAAGGATGAGTTCAGCGGCATCAA
GGGCATCACTCGCGACGACATGCTGGCCGCGCTGCGGATCCCGCCGCAGCTCATGGGCATCGTGCCGCAGAACGCTGGCG
GCTTCGGGTCGATCCGAGAGGCCGCTGCCGTGTGGGCGGCCAACGAGCTGGAGCCGCTGCAGGCGCGCATGTTGAAGATC
AATGACTGGGTGGGCGATGAGGTGATCGCCTTCACCCCCTACGCGCCGCCAGCGGCCGCGTAA

Protein sequence : 
MLTDQLPATAPAAPAVPARIEAFTFGDPTPVLDGRGVLDYLECWQNGRWYEPPVALDGLSKTTRSNPFLQSGLIFKRNML
ARTFKPHRLLTREAFEQLSLDWITLGNGYLERRRNRMGGALSLAAPLSKYMRRGITEGEYFQVRTWHDEHVFEPGSVFQL
READVDQELYGLPEWMPAMQSALLNESATLFRRKYYNNGSHAGFILYLTDPQQSQEDVDALRNAMKGAKGPGNFRNLFLY
SPGGNKDGLKLIPVSEVAAKDEFSGIKGITRDDMLAALRIPPQLMGIVPQNAGGFGSIREAAAVWAANELEPLQARMLKI
NDWVGDEVIAFTPYAPPAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 1e-114 70
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 1e-92 57
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 1e-92 57