Gene Information

Name : metC (XCAW_04304)
Accession : YP_007652267.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Resistance
Product : Cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4859759 - 4860955 bp
Length : 1197 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCAATCGCACCACTCATAGCCATGACGGCGAGCGCGCGCTGTCGCTCGCAACGCTGGCGATCCATGGAGGACAGTC
GCCAGATCCGAGCACCGGCGCGGTGATGCCGCCGATCTACGCGACGTCCACCTATGCGCAGTCCAGCCCCGGCGAGCATC
AGGGTTTCGAGTATTCGCGTACCCATAACCCCACGCGCTTCGCCTACGAGCGTTGCGTCGCCGCGCTGGAAGGCGGTACG
CGCGCATTTGCGTTCGCCTCCGGCATGGCCGCCACCTCGACGGTGATGGAGTTGCTGGATGCCGGCAGCCACGTGGTGGC
GATGGACGACCTGTACGGCGGCACCTTTCGCTTGTTCGAGCGCGTGCGTCGCCGCACTGCCGGCCTGGATTTCAGCTTCG
TCGACCTGACCGACCCGGCTGCGTTCGAGACGGCGATTCGCCCCGATACCAAGATGGTGTGGATCGAGACCCCGACCAAC
CCGATGCTCAAGCTGGTCGATATCGCTGCCATTGCCGAGATCGCGCGCAAGCGCGGCCTGCTGATCGTGGTCGACAACAC
CTTTGCTTCCCCGATGCTGCAGCGCCCGCTCAGCCTGGGTGCGGACATCGTCGTGCACTCGGCCACCAAGTATCTCAACG
GCCACTCGGACATGGTCGGCGGCATCGCGGTCGTTGGCGACAACGCCGAGCTCGCCGAGCAGATGGCGTTCCTGCAGAAC
TCCATCGGCGGCGTCCAGGGCCCGTTCGACAGCTTCCTCGCCTTGCGCGGCCTCAAGACCCTCCCGCTGCGCATGCGTGC
GCACTGCGAAAACGCCCTGGCGCTTGCGCAATGGCTGGAAACCCACCCTGCGATCGAAAAGGTCATTTACCCCGGCCTTG
CCTCGCACCCGCAACATGCGCTCGCGAAAAGCCAGATGTCCGGCTTCGGCGGCATCGTCTCCATCGTCCTCAAGGGCGGC
TTCGACGCAGCCAAGCGTTTCTGCGAAAAGACCGAATTGTTCACCCTGGCCGAATCGCTCGGTGGCGTGGAAAGCCTGGT
GAATCATCCCGCCGTCATGACGCACGCCTCCATTCCGGTGGCCCGACGCGACCAGCTCGGTATCAGCGATGCGCTGGTGC
GGTTGAGTGTGGGGGTTGAGGATGTGGGGGATCTGCGGGCGGATCTGGCCGCGGCACTCTCAGGAGTGGCCGCATGA

Protein sequence : 
MSNRTTHSHDGERALSLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNPTRFAYERCVAALEGGT
RAFAFASGMAATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFETAIRPDTKMVWIETPTN
PMLKLVDIAAIAEIARKRGLLIVVDNTFASPMLQRPLSLGADIVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQN
SIGGVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHALAKSQMSGFGGIVSIVLKGG
FDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARRDQLGISDALVRLSVGVEDVGDLRADLAAALSGVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-81 51
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-82 51
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-57 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC YP_007652267.1 Cystathionine beta-lyase BAC0207 Protein 9e-68 46