Gene Information

Name : avtA (XCAW_04191)
Accession : YP_007652154.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : PLP-dependent aminotransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4717330 - 4718601 bp
Length : 1272 bp
Strand : +
Note : -

DNA sequence :
ATGTCCACTGCCCCGCAAAAGCCGCTCGCCATCCGCGAGCGTCTGTCCGAAGTCCGCTACGAAATCCGGGGCGAGCTGGC
GCGACGAGCGCGGGAGCTGGAGGCGCAGGGCCGCAAGCTGATCAAGCTCAATATCGGTAACCCGGGTGCGTTCGGCTTCC
GTGCGCCGGAGCATCTGCAGCGCGCCATCGCCGACGACATGGGCCGCACCGATCCGTACACCCATCAGCAAGGCCTGCCG
GAAGCGCGCGAGGCGATCGCCACCGCATATGCGCGGCGCCAGCATCCGGATGCGCATCCGGACCGCATCTTCGTTGGCAA
CGGCGTCAGCGAACTGATCGATCTGTCGCTGCGTGCGCTGCTCAATCCCGGCGACGAAGTGCTGGTGCCCTCGCCCGACT
ATCCGCTGTGGTCGGCCGCGACCATCCTCAACGATGGTCGTCCCGTGTATTACCGCTGCGCCCCGGAAAACGGCTTCCAG
CCGGACCCAGTGGAGATCGAGACGCTGGTGTCCTCGCGCACCCGCGCCATCGTGCTGATCAATCCAAACAATCCCAGCGG
CGCCAGTTATTCGCGCGAACTGCTGGAGCGCATCGTGGCGATCGCCACCAAGCACAATCTGCTCTTGATGGTCGATGAGA
TCTACGACCAGGTGCTGTACGACGACGCGGCCTTCGTGCCGGTCGCGCCGCTGGCCGGCGCGCACCCGTGCATCACTTTC
AGCGGCCTGAGCAAGGTGCATCGCGCCTGCGGTTGGCGCGTGGGCTGGGCACTGCTGTCGGGCGACCAAGCGCGCATCAA
CGACTTGCGCAATGCGATGGACCTGCTCGGCGCCTTGCGCCTGTGCGCCAATGTACCAGGCCAGTACGCCATCGATGCGG
CCGTGAACGGGCCGGACACCATCTCGGCATTGTGCGCACCCGGCGGACGGCTGTACGAAACCCGCCGCGCGGTGATCGAG
GCCTGCGCGGCCAGCGAGCATCTGTCGCTGGTGGCACCGGCCGGTGCGCTGTATGCGTTCCCGGCAGTGGTGGGCGCGGC
GGCGCGCAACTTCGACGATCATGCGTTCGCCCTCGATCTGATGAACGAGGAAGGCGTGCTGGTGGTTCCCGGCTCCAGCT
TCAACGTGCCGTATCGCCATCATTTCCGCGTGACATTGATGCCGGAAGCCGGTGTGATGCGCGATGTGTTCGCGCGCATC
GACCGTGCACTGGCACGCCGCGCCGAAGCGGTCACCAAGGTGGTTCCACTCAAGCCACGCAGCGTGGCCTGA

Protein sequence :
MSTAPQKPLAIRERLSEVRYEIRGELARRARELEAQGRKLIKLNIGNPGAFGFRAPEHLQRAIADDMGRTDPYTHQQGLP
EAREAIATAYARRQHPDAHPDRIFVGNGVSELIDLSLRALLNPGDEVLVPSPDYPLWSAATILNDGRPVYYRCAPENGFQ
PDPVEIETLVSSRTRAIVLINPNNPSGASYSRELLERIVAIATKHNLLLMVDEIYDQVLYDDAAFVPVAPLAGAHPCITF
SGLSKVHRACGWRVGWALLSGDQARINDLRNAMDLLGALRLCANVPGQYAIDAAVNGPDTISALCAPGGRLYETRRAVIE
ACAASEHLSLVAPAGALYAFPAVVGAAARNFDDHAFALDLMNEEGVLVVPGSSFNVPYRHHFRVTLMPEAGVMRDVFARI
DRALARRAEAVTKVVPLKPRSVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 6e-72 42
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 6e-72 42
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 6e-72 42
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 6e-72 42