Gene Information

Name : nagA (XCAW_03867)
Accession : YP_007651830.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4320269 - 4321423 bp
Length : 1155 bp
Strand : -
Note : -

DNA sequence : 
ATGCACGCTCTCACGACTCAGGCACTGTGCAATGCACGTGTGCTCACCGACAACGGATTGCAGGACGGCCTGGTCGTGAT
GCTGGCTGGCACGCAGATCCAGGCGATCGTGCCGGCCGACGATGCGCGCGTTACGCAGGCCGATACGCGCCTGGACCTGG
GTGGCGCCAGCTTGTTGCCGGGCTTTATCGACATCCAGGTCAATGGCGGCGGCGGCGTGTTGTTCAACAACGCACGCGAC
CCCCAGGCACTGGCCACGATCGCCGCCGCGCATCGTCGCTTCGGCACCACCGGCATGCTGCCAACCTTGATCAGCGACAC
CGCTGAGGTGATGGCCGAAGCGATCGATGCCACTCGCCAGGCCATCGCGCAAGGCGTACCCGGCGTGCTCGGCATCCATC
TGGAGGGCCCGTACCTGAGTCCTGCGCGCAAGGGCACGCACGACGCGGACAAGTTCCGCGTACCGGACGCGCACGAGATT
GCCGTCGATACCTCATTGGACAATGGCGTCACCTTGATCACGCTCGCACCCGAGCGCGTTCCGCTGGACGATATCCGTGC
CTTCGTTGCCGGCGGCGCGCTCGTGTTCGCCGGCCACACTGCGGCCACCTACGAGCAGGCACGCGATGGCATTGCCGCCG
GCGTCAGCGGCTTCACGCACGTGTACAACGCGATGTCGCAGCTGGCTGGCCGCGAACCCAATGCGGTGGGCGCGGCACTG
GAAGACCCGACGATTTGGTGCGGCGTCATCGTCGACGGCGTGCACGTGCATCCGGCCAGCTTGCGTGTGGCGCTCGCGGC
CAAGCCACGCGGCAAGTTGCTGCTGGTCACCGACGCCATGCCGATGGTCGGCAGCGAAAGCGCCAGCTTCGATCTCTACG
GCGAAACCATCACCGCCGTGGACGGCGTGGTGCGAAATGCCGATGGTGCACTGGCCGGCTCCGCATTGGACATGGCCACC
GCCGTGCGCAACAGCGTGCGCTGGCTGGGCGTGGACCTGGCCGAAGCCGCGCGCATGGCTTCTACCTACCCCGCGCAATG
CATTGGCCTGGGCGAACGCCTGGGACGCATCGCCCCCGGCTACCAAGCCGATCTGGTGCTGGTGGATGACGATGTGCAGG
TGTTGAGCACGTGGGTGGCTGGGCAGCGCGACTAA

Protein sequence : 
MHALTTQALCNARVLTDNGLQDGLVVMLAGTQIQAIVPADDARVTQADTRLDLGGASLLPGFIDIQVNGGGGVLFNNARD
PQALATIAAAHRRFGTTGMLPTLISDTAEVMAEAIDATRQAIAQGVPGVLGIHLEGPYLSPARKGTHDADKFRVPDAHEI
AVDTSLDNGVTLITLAPERVPLDDIRAFVAGGALVFAGHTAATYEQARDGIAAGVSGFTHVYNAMSQLAGREPNAVGAAL
EDPTIWCGVIVDGVHVHPASLRVALAAKPRGKLLLVTDAMPMVGSESASFDLYGETITAVDGVVRNADGALAGSALDMAT
AVRNSVRWLGVDLAEAARMASTYPAQCIGLGERLGRIAPGYQADLVLVDDDVQVLSTWVAGQRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 1e-59 41
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 1e-59 41
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 1e-59 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nagA YP_007651830.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 5e-60 41