Gene Information

Name : ribD (XCAW_03836)
Accession : YP_007651799.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Pyrimidine reductase, riboflavin biosynthesis
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4283473 - 4284582 bp
Length : 1110 bp
Strand : -
Note : -

DNA sequence :
ATGAGTGAGGCCGCAACGACCGCCAGTGCCGACGACCATCGCTGGATGGCGCAGGCGTTGCGTCTGGCCGAGCGCGGCGC
CTACACCACCCGCCCCAATCCGATGGTGGGCTGCGTGATCGTGCGCGATGGCGTATGCGTGGGCGAGGGCTTTCATCAAC
GTGCCGGCGGCCCGCATGCCGAAGTCTTCGCGCTGCGTGCAGCGGGTGAGTTGGCGCGCGGTGCCACCGCGTATGTGACG
CTGGAGCCATGCGCGCATTACGGACGCACGCCGCCGTGTGCGCTGGCCTTGATCGAGGCAGGCGTCAGACGTGTGGTCGC
GGCGATGGCCGACCCGTTTCCGCAGGTCAATGGCGGCGGTTTCGCGTTGCTGCGCGAGGCAGGGATCGAAGTGCTGAGCG
GCGTGATGCAGGCGCAGGCGCGCACGCTTAACCGGGGATTTCTGTCGCGGGTGGAGCGTGGGCGGCCGTGGTTGCGGGTC
AAACTCGGCGCCAGCCTGGACGGCCGTACCGCGCTGGCCAGCGGCGAATCCAAATGGATCACCAGTGCCGATGCGCGTGC
AGATGTGCAGCGCTGGCGCGCACGTGCGGGCGCGATCCTGACCGGTGCAGGTACGGTGATGGCCGACGACCCATCCATGA
CGGTGCGGCTGGGCGAGGACACGCCGGTCGTGCCGCCGTTGCGCGTGGTGCTCGATGCCAGGCTGCGGACGTTGGCGTGC
AGGAACATTCGTCAGGGCGATGCGCCCACGCTGTATCTGCATGGCGAGAATGTGGCCGCGCAGTCGCTGGACGATGCGCA
GTTCCTTGCGATGCCGTTGCATGCCGGCCGCTTCGATCTGGCGGCTGTGTTGGCCCTGCTAGCCGAGCGCGGCATCAACG
AAGTCCACGTGGAAGGCGGCGCCACGCTGAGCGGTGCGCTGCTGCAGGCCGGGCTGGTCGACGAACTGCTGGTCTACATG
GCCCCGGTGTTGCTGGGCGACACCGCAAAGCCCTTGCTCGCTGGCCTTGGCATCGAAACGATGGCGCAGCGCGCTGCGCT
GCAGCTGCTGGATGTGCGCCAGCTGGGCCAGGATCTGCGTCTGCGCTATGCGCCGGTTGTTGCCGGGTGA

Protein sequence :
MSEAATTASADDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGELARGATAYVT
LEPCAHYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGFALLREAGIEVLSGVMQAQARTLNRGFLSRVERGRPWLRV
KLGASLDGRTALASGESKWITSADARADVQRWRARAGAILTGAGTVMADDPSMTVRLGEDTPVVPPLRVVLDARLRTLAC
RNIRQGDAPTLYLHGENVAAQSLDDAQFLAMPLHAGRFDLAAVLALLAERGINEVHVEGGATLSGALLQAGLVDELLVYM
APVLLGDTAKPLLAGLGIETMAQRAALQLLDVRQLGQDLRLRYAPVVAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-64 50
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-64 50