Gene Information

Name : XCAW_03521 (XCAW_03521)
Accession : YP_007651492.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3953608 - 3954495 bp
Length : 888 bp
Strand : +
Note : -

DNA sequence :
ATGCGCGGCGGTACCGGCCCGCGCGAGTCCAGGGCCTGCAAGCTCGACGGCTACCAGTCCTATCTGCGTGAGCGCGTCGT
GCAGGCGCATCCGCGCTGGATCCCGGCGACCGTGCTGTTGCGCGAGATCCAGGGGCGCGGCTACACGGGCGGCATCAGCC
AGCTCAAGGCCTTCCTGGCCCCGCTCAAGCAGTCCGAGCCCGAGCCGCTGGTGCGCTTCGAGACGCCCCCGGGTCAGCAG
ATGCAGGTGGATTTCACTTACGTGCGCCGGGGGCGCGATCCGCTGCTGGCGCTGGTCGCCACCCTGGGCTACAGCCGGGC
GAGCTACGTGAAGTTCGTGGCGTGCGCAGGCGAGGACATGACCACCCTGTGCACCGGCCTGCGCGAGGCGTTCGATTACT
TCGGCGGCGTGCCCGAGCATGTGCTGTTCGACAACACCAAGGCAGTCGTCATCGAGCGCGATGCCTACGGCGAAGGCCAG
CACCGCTGGAACAGCGCACTGCGCGAGCTCGCCGATACCTGCGGTTTCAAGCCTCGTCTGTGCCGCCCCTACCGTGCCAA
GACCAAGGGCAAGGTCGAGCGCTTCAATGCCTACCTCAAGGGCAGCTTCGTGGTGCCGCTGGCGGCAACGCTGGAAGCCA
GCGGGCTGCGGCTCGATGCCCACCTGGCCAACGTCCACGTGCGACGCTGGCTCGACGAAGTCGCCAATGCCCGTGTGCAT
GCCACCACCAAGGCGGTGCCGGCCGTGCGCCTGGCAGAGGAGCGTGCAGTCATGTTGGCGGCACCGGCGCTGAAGGCGCC
ACCACCGATACACCAGCGTGTCGTCTTGCCGCTGCAGAGCCTGCAGCATCCGCTGTGCGTGTACGACGCCTTGCTGGAGG
TGGTGTGA

Protein sequence :
MRGGTGPRESRACKLDGYQSYLRERVVQAHPRWIPATVLLREIQGRGYTGGISQLKAFLAPLKQSEPEPLVRFETPPGQQ
MQVDFTYVRRGRDPLLALVATLGYSRASYVKFVACAGEDMTTLCTGLREAFDYFGGVPEHVLFDNTKAVVIERDAYGEGQ
HRWNSALRELADTCGFKPRLCRPYRAKTKGKVERFNAYLKGSFVVPLAATLEASGLRLDAHLANVHVRRWLDEVANARVH
ATTKAVPAVRLAEERAVMLAAPALKAPPPIHQRVVLPLQSLQHPLCVYDALLEVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api83 CAF28557.1 transposase Not tested YAPI Protein 2e-56 48
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 1e-56 48
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 3e-56 48
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 1e-56 48
y2411 NP_669718.1 transposase Not tested HPI Protein 3e-56 48
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 1e-56 48
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 3e-56 48
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-56 48
unnamed CAA21403.1 - Not tested HPI Protein 3e-56 48
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 3e-56 48
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 2e-56 48
unnamed CAD33718.1 hypothetical protein Not tested PAI I 536 Protein 7e-38 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XCAW_03521 YP_007651492.1 Transposase VFG1607 Protein 7e-57 48
XCAW_03521 YP_007651492.1 Transposase VFG1461 Protein 1e-56 48
XCAW_03521 YP_007651492.1 Transposase VFG1514 Protein 7e-57 48
XCAW_03521 YP_007651492.1 Transposase VFG1626 Protein 7e-57 48
XCAW_03521 YP_007651492.1 Transposase VFG1459 Protein 4e-38 46