Gene Information

Name : wcaA (XCAW_03330)
Accession : YP_007651303.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Virulence
Product : Glycosyltransferases involved in cell wall biogenesis
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3709106 - 3710152 bp
Length : 1047 bp
Strand : -
Note : -

DNA sequence :
GTGAGCGCCATCGCCACTGCCCAGGTGCCGGTTGCGTCCGAACGCCTGACGGTGCTCATCGCGGCCTTCAATGAAGAAAC
CAGCATTCCCCTGCTGCATCCGCGCCTGTGCGCGGTGTTGGCGCAGCTGCCTGCAGTGCAGACGCACGTGCTGTATGTCG
ACGACGGCAGCACCGATGGCACCTGGGAGGTGTTGCATGCGCTGACCGAGGCGGATGCGCAGGTGAGTGCGGTGCGGCTG
TCGCGTAATTTCGGCAAGGAAGTGGCGATTTCTGCCGGACTGGACCATGTGCTGCCGGGGGCTGTGGTGTTGCTCGATGC
CGATGGCCAGGATCCACCGGAACTGATCCCGGAATTCGTTGCGTTGTGGCGTGGCGGCTACGACAACATCTTCGGTACGC
GGGTCATTCGCGAGGGCGAGAGTTGGCTCAAACGTAGCGCTGCGCATGCGTTTTATCGTGTGATAAGGCGCTTGTCGCGC
ACCCCGATTCCTGCCGATACCGGTGATTTCCGCTTGCTGTCGCCACGTGTCGTGCAAGCCTTGCAGCAGCTGCGCGAACG
CCACCGTTTCATGAAGGGGCTCTTCGGTTGGGTCGGGTTTCGCCAGGTGGCGCTGCCGTATCGGCGTGAGCCGCGTCTGT
CCGGGCACAGTAAGTTCACGGTCTGGCGGCTGTGGAATTTCGCACTAGATGGCATTACCAGTTTTTCCACGGTGCCGCTG
CGCGCGGCCACGTATCTGGGCCTGCTTACCGCGCTGCTGGCATTCCTGTTCGGTGCCTGGGTCGTCATCAAGGCTGCGCT
GGTGGGCGACCCCGTGGCCGGTTGGCCGACGCTGATGTCGGTGATCCTGTTTCTGGGCGGCGTTCAGCTGATTGCTCTGG
GCCTGATTGGCGAATACCTGGGCCGCTTGTACGACGAGGCCAAGCAGCGCCCGTTGTATCTGGTCGATACCCACCGCGGC
GCGGTAGGAGTAGGCTGCGATCACCAGAGCAAGCGCGGAGCGGGCCATGCAGACCGTACGACAGCTGTTGGGGACCAAGC
AGGTTGA

Protein sequence :
MSAIATAQVPVASERLTVLIAAFNEETSIPLLHPRLCAVLAQLPAVQTHVLYVDDGSTDGTWEVLHALTEADAQVSAVRL
SRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTRVIREGESWLKRSAAHAFYRVIRRLSR
TPIPADTGDFRLLSPRVVQALQQLRERHRFMKGLFGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPL
RAATYLGLLTALLAFLFGAWVVIKAALVGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYLVDTHRG
AVGVGCDHQSKRGAGHADRTTAVGDQAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 4e-55 43
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 1e-56 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wcaA YP_007651303.1 Glycosyltransferases involved in cell wall biogenesis VFG0670 Protein 2e-56 44