Gene Information

Name : potE (XCAW_03267)
Accession : YP_007651241.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Virulence
Product : Amino acid transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3639925 - 3641307 bp
Length : 1383 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGACACACCACGCCGCGACGATGCGGCCACGCTGGAACGCTTCGGCTACGCACAGGAGCTCAAGCGGCAGCTCAC
GCTCAAGGATCTGTTGATCTACGGGCTGGTGTGCATGGTGCCCACGGCGCCGTTCTCGATCTTCGGCGGCGTCTTCGACA
TCAGTGCCGGGATGGTGCCGCTGACCTACCTGGTCGGCTTCGTGGCGATGCTGTTCACCGCACTGAGCTACCAGCAGATG
TCGCAGGCATTTCCGGTGGCGGGTTCGGTGTATGCCTATGTCGGGCGCGGGCTGAGCAGCGGCATGGGCTTTCTGGCCGG
CTGGGCGATTCTGCTCGACTACCTGCTGGTGCCGACCCTGCTGTATGTGGTCGGCGCCAATGCGATGCATACCGTGTTGC
CGGCGGTACCCCAGCCGGCGTGGATTGCGTTCTTCGTGGTGCTCAACACGGTGGTGAACCTGCGTGGCATCGAAACCACC
GCACGCGCCAATCGCTTTTTCCTGCTTGCGCAGTTGCTGGTGTTGGCGGTGTTCGTGGTGCTGGCGACGCTGGCGATCCA
GCGCGGCGTCAATGGGGCGCACTGGAGCTGGCGCCCGCTGTATAACCCACAAGCGTTTTCTCCGCAGTTGATCTTCAGCG
CGTTGTCGGTGGCGGTGGTGTCGTTCCTCGGCTTCGATGCAATCTCCACCATGTCCGAGGAAGCGCGCGGCGGCAACCGT
GTGGTGGGACGTGCAACCTTGCTGGCATTGCTGATCGTGGCAGGGCTGTTCGTCTTGCAAACCTGGCTGGCGGCATTGCT
GCAGCCCACCCTGCAGCGCTACCCAAGCGCGCAGGCATCCAACGATGCGTTCTTCGAGATCGGGCGATTGATCGCCGGGC
CATGGCTGCAGATCGTCATTGCGCTCACCGTGGCGATCAGCGCGGCAATCGCCAATTCATTGGTTGCACAGGCGGCCACC
TCGCGGCTGTTGTTCGCCATGGCGCGCGACCGGCAGTTGCCGGGCTTTCTGCGCTACATCCACCCACGCACCGGCGTGCC
GCAGCGCGCGATCCTGCTGGTGGCGGGCCTGAGTCTGGTACTGGGCGAAGTCTTCGTCGGGCAGATCGCGCTGCTGTCGT
CGCTGTGCAACGTCGGCGCACTGACCGCCTTCGTGCTGCTGCATATCGCAGTGCTGTGGCACTTCCGCACCCAGGGCCGG
CATGTGCTGCATGGCGCGGTGCCCTTGATCGGGATCGTCATCCTGGCCTACGTGCTGCTCAATGCCGATCTGCATGCACA
ACTGGGCGGCGCTGCGTGGATGGCGGTAGGGCTGGCGGTACTGGCGTTCTTGAAACTCAGCGGACGCTCCACCGAATTCC
GCGCCAGCGACGCGCTGGAATAG

Protein sequence : 
MIDTPRRDDAATLERFGYAQELKRQLTLKDLLIYGLVCMVPTAPFSIFGGVFDISAGMVPLTYLVGFVAMLFTALSYQQM
SQAFPVAGSVYAYVGRGLSSGMGFLAGWAILLDYLLVPTLLYVVGANAMHTVLPAVPQPAWIAFFVVLNTVVNLRGIETT
ARANRFFLLAQLLVLAVFVVLATLAIQRGVNGAHWSWRPLYNPQAFSPQLIFSALSVAVVSFLGFDAISTMSEEARGGNR
VVGRATLLALLIVAGLFVLQTWLAALLQPTLQRYPSAQASNDAFFEIGRLIAGPWLQIVIALTVAISAAIANSLVAQAAT
SRLLFAMARDRQLPGFLRYIHPRTGVPQRAILLVAGLSLVLGEVFVGQIALLSSLCNVGALTAFVLLHIAVLWHFRTQGR
HVLHGAVPLIGIVILAYVLLNADLHAQLGGAAWMAVGLAVLAFLKLSGRSTEFRASDALE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 3e-64 43
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 3e-64 43
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 6e-65 43
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 6e-65 43
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 5e-61 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
potE YP_007651241.1 Amino acid transporter VFG0480 Protein 1e-64 43