Gene Information

Name : mutS (XCAW_03047)
Accession : YP_007651021.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Virulence
Product : MutS-like ATPases involved in mismatch repair, family 2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3403954 - 3406509 bp
Length : 2556 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCAATTCTTCGCAGCCAAATCGGACTACCCCGATCTGCTGCTGTTCTTCCGCATGGGCGATTTCTACGAGCTGTT
CTACGACGACGCGCGCAAGGCTGCGCGGCTGCTCGACATCACCCTGACCCAGCGCGGCAGCTCCGGCGGTGCGCCGATTC
CCATGGCCGGGGTGCCGGTGCATGCGTATGAAGGCTATCTGGCGCGCTTGGTGGCACTGGGCGAGTCAGTGGCGATCTGC
GAGCAGATCGGCGACCCGGCGCTGGCCAAGGGATTGGTCGAGCGCAAGGTCGTGCGCATCGTCACGCCTGGCACGGTCAC
CGACGAGGCGCTGCTGGACGAACGTCGCGACACCTTGTTGATGGCGATCTCGCGCAGCAAGCAAGGTTACGGCCTGGCCT
GGGCCGATCTGGCCGGCGGCCGCTTCTTGGTCAATGAAGTGGACAGCGCCGATGCGCTGGAAGCGGAAATCGCGCGTCTG
GAACCGGCCGAACTGTTGGTGCCCGACGAAGACAACTGGCCCGAATTCCTGCGCGGGCGCATCGGCGTGCGGCGCCGGCC
GCCGTGGTTGTTCGATGCCGACAGCGGGCGCCGCCAGCTGCTGGCGTTCTTCAAACTGCACGATCTGTCCGGCTTCGGCA
TCGACGACAAACCTTGCGCCACGGCGGCCGCCGGCGCATTGCTCGGGTATGTCGAAGAGACCCAGAAACAGCGCTTGCCG
CACCTGACCTCGATCGCGATGGAAGTGGCCAGCGAGGCCATCTCGATGAACGCGGCCACGCGCCGGCATCTGGAGTTGGA
CACCCGCGTCGATGGCGATACCCGCAACACCTTGCTCGGCGTACTGGACAGCACCGTCACGCCGATGGGTGGGCGTCTGC
TCCGGCGCTGGCTGCACCGTCCGCTGCGCCTGCGCGATGTGCTGGTGCAGCGCCACCATGCGGTCGGCACGTTGATCGAT
GCAGCTGCCGATGCCGATCTGCGCGAAGCCTTCCGTGCGCTCGGCGATCTGGAACGCATCCTCACCCGCGTGGCCTTGCG
CTCGGCGCGGCCGCGCGATTTTTCCACCTTGCGCGATGGCCTGGCGCTGTTGCCGAAGGTGCGCGCAATCCTGGCACCGT
TGGATTCGCCGCGCCTGCAGGCGCTGCATGCCGAACTCGGCGAGCACGATGCCACCGCGCATCTGTTGATCAGCGCAGTG
GCCGAGACGCCGCCGCTCAAGCTCAGCGACGGCGGCGTGATCGCCACCGGCTACGACGCCGATCTGGATGAGCTGCGTCG
GTTGTCCACCAATGCCGATCAATTCTTGATCGACCTGGAACAACGCGAGCGCGCCAGCAGCGGCATCGCCACGCTCAAGG
TCGGCTACAACCGCGTGCACGGCTACTACATCGAGATCAGCAAGGGCCAGGCGGAGAAAGCCCCGTTGCACTACAGCCGC
CGGCAGACGTTGACCAACGCCGAGCGCTACATCACCGAAGAACTCAAGAGTTTCGAAGACAAGGTGCTGTCCGCGCGCGA
GCGTTCGCTGTCGCGCGAAAAACTGTTGTACGAAGGCCTGCTCGATGCGCTTGGCACCGAGCTGGAAGGTCTCAAGCGCT
GCGCAGGTGCACTCAGCGAACTGGATGTCCTGGCCGGCTTTGCCGAGCGCGCGCAGGCACTGGATTGGTCGCAGCCGGAA
CTGGACAGCGCCCCCTGCCTGCGCATCGAACGCGGCCGTCACCCGGTCGTGGAGGCGGTACGCGAGCAACCGTTCGAGCC
CAACGATCTGGACCTGCACAGCGATCGGCGCATGCTGGTGATCACCGGCCCGAACATGGGCGGTAAATCGACCTACATGC
GGCAGAACGCCCTGATCGTGCTGTTGGCGCATATCGGCAGCTACGTGCCGGCCAGCCGTGCGGTGATCGGGCCGATCGAC
CGCATCCTCACCCGCATCGGCGCCGGCGACGACCTGGCGCGCGGGCAGTCGACCTTCATGGTGGAAATGGCCGAAACCAG
CTACATCCTGCATCACGCCACCCCGCAATCGCTGGTGCTGATGGACGAGATCGGCCGTGGCACCTCCACCTACGATGGCC
TGGCACTGGCCGATGCAGTCGCGCGCCATCTGGCGCAGACCAATCGCTGCTACACGCTGTTTGCCACGCATTATTTCGAG
CTCACCGCACTGGCCGACGCATCGCATGCCGGTGGCGCCAGCGGTATCGCCAACGTGCATCTGGACGCGGTCGAACACGG
CGAGCGTCTGGTGTTCATGCACGCAGTGAAAGATGGCCCGGCCAATCGCAGTTTCGGCCTGCAGGTGGCCGCACTTGCCG
GGCTGCCCAAGGCGGCGGTAACGCAGGCGCGCCGGCGCCTGGCGGAACTGGAACAACGCGGCGGCGAAAGCCACAGCGCG
CAGATGGCGCCCACCGCACTGGATGCGCCGCAACAATTCGGACTGTTCACCGCACCCTCCTCCGCTGCGCAGGAAGCCTT
GCAAGCGCTCGACCCGGATGAGCTCACGCCCAAGCAGGCGCTGGAGGCGCTGTATCGGTTGAAGGCGTTGCTTTGA

Protein sequence :
MKQFFAAKSDYPDLLLFFRMGDFYELFYDDARKAARLLDITLTQRGSSGGAPIPMAGVPVHAYEGYLARLVALGESVAIC
EQIGDPALAKGLVERKVVRIVTPGTVTDEALLDERRDTLLMAISRSKQGYGLAWADLAGGRFLVNEVDSADALEAEIARL
EPAELLVPDEDNWPEFLRGRIGVRRRPPWLFDADSGRRQLLAFFKLHDLSGFGIDDKPCATAAAGALLGYVEETQKQRLP
HLTSIAMEVASEAISMNAATRRHLELDTRVDGDTRNTLLGVLDSTVTPMGGRLLRRWLHRPLRLRDVLVQRHHAVGTLID
AAADADLREAFRALGDLERILTRVALRSARPRDFSTLRDGLALLPKVRAILAPLDSPRLQALHAELGEHDATAHLLISAV
AETPPLKLSDGGVIATGYDADLDELRRLSTNADQFLIDLEQRERASSGIATLKVGYNRVHGYYIEISKGQAEKAPLHYSR
RQTLTNAERYITEELKSFEDKVLSARERSLSREKLLYEGLLDALGTELEGLKRCAGALSELDVLAGFAERAQALDWSQPE
LDSAPCLRIERGRHPVVEAVREQPFEPNDLDLHSDRRMLVITGPNMGGKSTYMRQNALIVLLAHIGSYVPASRAVIGPID
RILTRIGAGDDLARGQSTFMVEMAETSYILHHATPQSLVLMDEIGRGTSTYDGLALADAVARHLAQTNRCYTLFATHYFE
LTALADASHAGGASGIANVHLDAVEHGERLVFMHAVKDGPANRSFGLQVAALAGLPKAAVTQARRRLAELEQRGGESHSA
QMAPTALDAPQQFGLFTAPSSAAQEALQALDPDELTPKQALEALYRLKALL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS YP_007651021.1 MutS-like ATPases involved in mismatch repair, family 2 VFG0562 Protein 0.0 55