Gene Information

Name : dnaB (XCAW_02866)
Accession : YP_007650841.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3192301 - 3193731 bp
Length : 1431 bp
Strand : -
Note : -

DNA sequence :
ATGTCCGCTCGTCCTGGTTTCCGTTCCAAGCGCAGTCGCGATCGCGACGACGACGATTACGATCGTCCCGAGCCGCGTCT
GGACCAGCTGCGGGTACCGCCGCATTCGGTCGAGGCCGAGCAGGCGGTGCTGGGTGGCTTGATGCTGGCGCCGGACGCGT
TCGACCGGGTCAACGACCAGCTCACCGAAAACGACTTTTACCGGCGCGACCATCGGCTGATCTACCGCGCGATTCGCGAA
CTCAACGAGAAAGACCGCCCGTTCGATGCAGTGACCCTGGGCGAATGGTTCGAGTCGCAGGGCAAGCTGGAGCAGGTGGG
CGATGGCGCGTACCTGATCGAGCTGGCCAGCACCACGCCGTCGGCGGCCAACATCGCCGCGTATGCGGAAATCGTGCGCG
ACAAGGCGGTGCTGCGGCAGTTGATCGAAGTGGGCACCACCATCGTCAACGACGGCTTTCAGCCGGAAGGGCGCGACAGC
GTCGAGTTGCTGTCCTCGGCCGAAAAGGCCGTGTTCAAGATCGCCGAAGCCGGCGCGCGTGGGCGCACCGATTTCGTGGC
CATGCCCGGGGCATTGAAGGATGCCTTCGAAGAGCTGCGCAACCGCTTCGAAAACGGCGGCAACATCACGGGTCTGCCGA
CCGGCTACACCGATTTCGATGCGATGACCGCCGGCCTGCAGCCGACCGACCTGATCATCCTGGCGGCGCGTCCGGCGATG
GGCAAAACCACCTTTGCGCTGAACATCGCCGAATATGCGGCGATCAAGTCCAAGAAGGGCGTGGCGGTGTTTTCGATGGA
AATGTCGGCCTCGCAGTTGGCCATGCGCCTGATCTCCTCCAATGGCCGCATCAATGCGCAGCGCCTGCGTACCGGTGCGC
TGGAAGACGAGGATTGGGCGCGCGTGACCGGCGCGATCAAGATGCTCAAGGAAACCAAGATCTTCATCGACGACACACCT
GGCGTGTCGCCGGAAGTACTGCGTTCCAAGTGCCGCCGGCTCAAGCGCGAGCACGACCTGGGCCTGATCGTCATCGACTA
CCTGCAGCTGATGTCGGTGCCGGGCAACAGCGAAAACCGCGCCACCGAAATTTCGGAAATCTCGCGCTCGCTGAAAGGCT
TGGCCAAGGAGCTCAACGTGCCGGTGATTGCGTTGTCCCAGCTCAACCGCTCGCTGGAAACGCGCACCGACAAGCGCCCG
GTGATGGCGGACTTGCGCGAGTCGGGCGCGATCGAGCAGGACGCGGACATGATCGTCTTCATCTACCGCGACGACTACTA
CAACAAGGAAAATTCGCCGGACAAGGGCCTGGCCGAAATCATCATCGGCAAGCACCGCGGCGGACCGACCGGCTCGTGCA
AGCTGAAGTTCTTCGGCGAATACACCCGGTTCGACAACCTGGCGCACGACTCGGTGGGCAGTTTCGAGTAA

Protein sequence :
MSARPGFRSKRSRDRDDDDYDRPEPRLDQLRVPPHSVEAEQAVLGGLMLAPDAFDRVNDQLTENDFYRRDHRLIYRAIRE
LNEKDRPFDAVTLGEWFESQGKLEQVGDGAYLIELASTTPSAANIAAYAEIVRDKAVLRQLIEVGTTIVNDGFQPEGRDS
VELLSSAEKAVFKIAEAGARGRTDFVAMPGALKDAFEELRNRFENGGNITGLPTGYTDFDAMTAGLQPTDLIILAARPAM
GKTTFALNIAEYAAIKSKKGVAVFSMEMSASQLAMRLISSNGRINAQRLRTGALEDEDWARVTGAIKMLKETKIFIDDTP
GVSPEVLRSKCRRLKREHDLGLIVIDYLQLMSVPGNSENRATEISEISRSLKGLAKELNVPVIALSQLNRSLETRTDKRP
VMADLRESGAIEQDADMIVFIYRDDYYNKENSPDKGLAEIIIGKHRGGPTGSCKLKFFGEYTRFDNLAHDSVGSFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 3e-96 50
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 4e-88 47
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-87 47
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-80 46
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-85 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-76 46
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-76 46
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 8e-83 45
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 3e-67 42