Gene Information

Name : tra5 (XCAW_02825)
Accession : YP_007650800.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3160796 - 3161062 bp
Length : 267 bp
Strand : -
Note : -

DNA sequence :
ATGAAGACATCCCGTTTCACCGACAGCCAGATCATCGCCGTCCTCAAGCAGGCCGAGGCCGGCGCGTCAGTGCCGGAGTT
GTGCCGAGAACACGGCATCAGCTCGGCAACGTTTTATAAGTGGCGCAGCAAGTTCGGCGGCATGGATGCGTCGCTGATGT
CCCAGCTCAAGGAGCTGCAGGACGAGAACCGGCGCCTGAAGAAGATGTACGCCGAATCGCAAATGACTGCCGAAGTACTT
CGTGAGGCGATGGCAAAAAAATGGTGA

Protein sequence :
MKTSRFTDSQIIAVLKQAEAGASVPELCREHGISSATFYKWRSKFGGMDASLMSQLKELQDENRRLKKMYAESQMTAEVL
REAMAKKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 3e-18 56
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 3e-18 56
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 5e-18 55
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 5e-18 55
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 1e-20 49
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-16 48
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 1e-16 48