Gene Information

Name : tra5 (XCAW_02824)
Accession : YP_007650799.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3159975 - 3160802 bp
Length : 828 bp
Strand : -
Note : -

DNA sequence :
ATGGTGAGGCCATCTCAACGCCGGGAGATGGCCCGATGGGCGGTGGCGAACAAGGCGATGAGCATCCGGCACGCCTGCCA
GGCGTTTGAGGTCAGCCAGACCTGCTACCGCTATCAAGCCAAGGCCAGCGAGGAGAACGTCCAGATTGCCGATTGGCTTG
TCCGGTTGACCACGACCTATCGTGATTGGGGGTTCGGCCTATGCTTTTTGCACCTGCGTAACGTGAAGGGCTTCGGCTGG
AACCACAAGCGGGTGTACCGCATCTACCGGGAGCTGGAGTTGAACCTGCGGATCAAGCCAAAGAAACGACTGGTACGTGA
GCGGCCAGAGCCGTTGTCGGTACCGGAGGCGATCAACCAGGTCTGGTCGATGGATTTCATGCACGACCAGTTGGCCGATG
GTCGCAGCTTCCGGTTATTTAACGTGCTCGACGACTTCAATCGCGAGGGTCTGGGCATCGAGGTCGACCTGTCGCTGCCA
TCGGCCCGGGTGATCCGCTCGTTGGATCAGATCATCGACTGGCGCGGCAAGCCAAACGCCATTCGCTGCGACAACGGCCC
GGAGTACATCAGCGGCGCGCTGCTAGCTTGGGCACAGCAGCGCGGCATTCGGATCGAGCACATCCAGCCGGGCAAACCGC
AGCAAAATGCCTACGTCGAACGTTACAACCGCACCGTCCGCTACGCCTGGCTGGCCACAACATTGTTCGACACCATCGAG
CAGGTTCAGGACAAGGCCACGCGCTGGCTATGGACGTACAACCATGAGCGCCCCAACATGGCGCTCGGCGGTATCACCCC
AGCAATGAAATTGGCGATGGCCGCGTAG

Protein sequence :
MVRPSQRREMARWAVANKAMSIRHACQAFEVSQTCYRYQAKASEENVQIADWLVRLTTTYRDWGFGLCFLHLRNVKGFGW
NHKRVYRIYRELELNLRIKPKKRLVRERPEPLSVPEAINQVWSMDFMHDQLADGRSFRLFNVLDDFNREGLGIEVDLSLP
SARVIRSLDQIIDWRGKPNAIRCDNGPEYISGALLAWAQQRGIRIEHIQPGKPQQNAYVERYNRTVRYAWLATTLFDTIE
QVQDKATRWLWTYNHERPNMALGGITPAMKLAMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-54 48
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 2e-38 41