Gene Information

Name : smpB (XCAW_02814)
Accession : YP_007650789.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : tmRNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3148582 - 3149085 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence :
ATGAGCAAGAAACAGACCAAGGATAAAGCAAACGGCGCGAAGGCCACGAAAACCATCGCGTTGAACAAGCGTGCGCGCCA
CGAATACCACCTGGAAGAACGCTACGAAGCCGGCCTGGCACTGCAGGGCTGGGAGGTCAAGGCGATCCGCGCCGGCCGCG
CCAACATCGTCGACGGCTATGCCTATGTGCGCTCCGGCGAGATCTACCTGATCGGCGCGCAGATCACGCCGTTGATCCAG
GCCTCCACCCACACGGTGCCAGTGGAACGGCGCGACCGCAAACTGCTGCTGCACCGGGCCGAGATCGACAAGGTGCTCAG
CCGCGTGGAGCGCGAAGGCTACACCCTGGTGCCTACCGCGCTGTACTGGAGCAGCAACAAGGTCAAGCTGGAAATCGCCC
TGGCCAAGGGCAAACAGAATCACGACAAGCGCGACGCCGCCAAGGACCGCGATTGGCAGCGCGACAAGCAGCGCGTGATG
CGGCGGCATAATCGCGATGCGTGA

Protein sequence :
MSKKQTKDKANGAKATKTIALNKRARHEYHLEERYEAGLALQGWEVKAIRAGRANIVDGYAYVRSGEIYLIGAQITPLIQ
ASTHTVPVERRDRKLLLHRAEIDKVLSRVEREGYTLVPTALYWSSNKVKLEIALAKGKQNHDKRDAAKDRDWQRDKQRVM
RRHNRDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 2e-41 54
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 3e-22 43
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 5e-21 42