Gene Information

Name : XCAW_02427 (XCAW_02427)
Accession : YP_007650409.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Hypothetical Protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2699852 - 2701459 bp
Length : 1608 bp
Strand : +
Note : -

DNA sequence :
ATGCGGTTCCGCGTCCGCGCCTATTGCCTGGCGCCCGCCCGTGCTTCGGCCCCCATCATGGCGCGCTGGTCACGAATGAC
GCCCGAGGCTCGCATGACGCTCTACACGACGGACTACCTGGAGTACTACCTCACCCTCGTGGGTTGGATCGTCCAGAATG
GCATCTGGAACATCCTCGTGGCGAGCGGCGCGTTCGCCCTGCCCTTCGTCGCCATCGTCATCCAGGAATGGCTGCGGGCA
CGCGGGGAAGGCGCGGACGAAGGCAACAAGGGGGTGCTGTCGGCGGCGCGGATCGAGAACCGCGTGTGGGTGGCCGTGGT
GGTCATCCTGTTCGCCGGCATCCCCTTCATCGATGTGGACCTCCAGACGATCCAGTTCGACGCCAGCCGCTCCAAACAGT
GCAAGGTCGACGTGGCGACACCCCAGGACACGCGCTGGTCGAATGCCTTCACCACGCTCAACAACCAAAGTGCGCGGGTG
CCGGTGTGGTGGTTTTTCATGCATGCGATTTCCAAGGCCGTGACCGGCGCGGCCGTCGCGGCCATCCCTTGCGGAACCGA
CCTGCGGCAGATGCGCATGGACATCGATAGCACGCGCATCAACGACCCGGTACTGGCCCAGGAGGTGGCCGACTTCACCC
GGGACTGCTACGGGCCCGCGCGCGCGAAGCTTTTCATGGCACGGCCCGACCTCTCGGGTGCCCAGATGGACGATGTGACC
TGGATCGGATCAACGTATTTTGTGGGGACGGGCGGCTTCTACGACAGCTACCACTCCCAGACACCCCGCACCGCCTGGCC
CTATGACACGACCCGCGATGCGGGACTGGCACAGGCAACGAATGGTGGCGGCTACCCTACCTGCAGGCAATGGTGGAACG
ATGGCGAGCGGGGCCTGCGCAGCCGGCTGCTGGCGCAGTTGGACTCGGGGCTCCTCGCTCGTGTGGGCCGCTGGGCAAGC
TTCGTGTCCCGACAGCAAGCCGACGACGCGATCATTCGCGCCATCGCCGCGCCCCGCCAGCAGATGATGAACCAGGGTCA
GGCATACGCAGACTACGGCGGCCAGGTCGATATGACCCTGCCCAATATTGTCACGCGAGGTGCTGCGGATGTAGGCCTCG
CCGCCGGCTCTGTCGGGTTCTTCCCGGCCATGGACGTCGTGCGCCAGGCCCTGCCGATGGTGCTGTCGTTTCTCAAGATG
GCCATGGTGATCTGCGTGCCGCTCGTCCTTTTGTTCGGCACCTACGACCTCAAGGCCGTCGTGACGATGAGCTGCGTGCA
GTTCGCACTCTTTTTCGTGGACTTCTGGTTCCAACTGGCCCGCTGGATCGACAGCACGATACTGGATGCCCTCTACGGCT
GGAGCTCACCGCACAGCAACTTCAACCCCTTGCTGGGACTGAATAACGCGTTCGGCGACATGCTGCTCAACTTCGTGATG
GCCATGATGTTCATCGTGCTACCCAGCTTATGGATTGCCGCTTTGGGTTGGGCCGGTGTTCGTGCGGGCAATATCGCTCA
GATGCTCACGACTGGTACTGAGGGTGCTCGATCCTCTGGAGGCAAGGGCGGCGACATCGCAATCAACGCGACGAAATCTC
TACGTTAG

Protein sequence :
MRFRVRAYCLAPARASAPIMARWSRMTPEARMTLYTTDYLEYYLTLVGWIVQNGIWNILVASGAFALPFVAIVIQEWLRA
RGEGADEGNKGVLSAARIENRVWVAVVVILFAGIPFIDVDLQTIQFDASRSKQCKVDVATPQDTRWSNAFTTLNNQSARV
PVWWFFMHAISKAVTGAAVAAIPCGTDLRQMRMDIDSTRINDPVLAQEVADFTRDCYGPARAKLFMARPDLSGAQMDDVT
WIGSTYFVGTGGFYDSYHSQTPRTAWPYDTTRDAGLAQATNGGGYPTCRQWWNDGERGLRSRLLAQLDSGLLARVGRWAS
FVSRQQADDAIIRAIAAPRQQMMNQGQAYADYGGQVDMTLPNIVTRGAADVGLAAGSVGFFPAMDVVRQALPMVLSFLKM
AMVICVPLVLLFGTYDLKAVVTMSCVQFALFFVDFWFQLARWIDSTILDALYGWSSPHSNFNPLLGLNNAFGDMLLNFVM
AMMFIVLPSLWIAALGWAGVRAGNIAQMLTTGTEGARSSGGKGGDIAINATKSLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C40 AAN62133.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-165 72
ORF SG48 AAN62270.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-171 70
pph92 CAI36133.1 hypothetical protein Not tested PPHGI-1 Protein 8e-140 59
unnamed ABR13354.1 hypothetical protein Not tested PAGI-5 Protein 6e-134 55
RL014 AAP84141.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-133 55
EXA17 ABD94626.1 conserved hypothetical protein Not tested ExoU island A Protein 9e-134 55
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 4e-90 44
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 4e-90 44
PMI2570 YP_002152289.1 hypothetical protein Not tested Not named Protein 3e-83 41