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Name : XCAW_01958 (XCAW_01958) Accession : YP_007649947.1 Strain : Xanthomonas citri Aw12879 Genome accession: NC_020815 Putative virulence/resistance : Virulence Product : Nucleoside-diphosphate sugar epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 2163450 - 2165357 bp Length : 1908 bp Strand : - Note : - DNA sequence : ATGATTTCCTGGCGTGACCGTTTGACCAAGGCGCTGCCGCAGATAGCGGTCGTGGTACATGACCTGCTGATGGTGTGGGT GTGCTGGCAGCTGCTGCATGCCGGCCGCTACTCGATGCTACGCGACGCGCCGAATCTGCCGCTGTGGGACTGGCGCACAG CGGTGGTGTTGGTGGCGCAGGGCCTGGTGTTCTGGAAGATGGGGTTGTACCGCGGGTTGTGGCGCTTCGCCTCGGTGCCG GACCTGTGGAACATCTTCAAGGCGAGTTTTCTTGGACTCGTCGCAATCGTGCTGGCGCTGGCGTACGACCGTCTGGATGG CGTGCCGCTGTCGGTGCTGGTGGTCTATCCATTTGCGTTGTCGGCGCTACTTGGCACGCCGCGTCTGCTGTATCGCGCAT GGAAGGATTATCAGATTGCGCACTCCGGCGATGCCGCGCAGCGCGTGCTGATCCTTGGCGCTGGTCGGGCTGCTGAAGGG TTGGTGCGCGATCTGCGTCGCACCGGCGCATTTGTGCCGGTCGGGTATTTGGACGACGCCAATAACCTGCATGGGGCCAA GATCCAGGGTCTCAATGTGCTGGGCAATCTGGATCAGGCCGCCGCCATTGCCAAGGAGACCGCCGCCAAATTGCTGGTGA TCGCAATCCCGTCGCTGGACGCCTCCGGCATGCAGCGCGTCGTGGCGATCTGCGAAAGCACCGGCCTGCCGTTCCGCATG GTGCCCAAGCTGATCAACGTGCTGGAGGGGCGCTCGTTGCCGGGCGAGTTGAAGGAGGTCGCGATCGAGGACCTGCTCAA CCGCAAGCCGGTCACGCCCGACTGGCGCCTGATCCGCGACTGGCTGACCAACAAGACCGTGATGGTGACCGGCGCCGGCG GCTCGATCGGTTCGGAAGTCTGCCGCCAGTGCGCGCGCCACGGCGCGCGTCGGATCGTGCTGCTGGAAATCGACGAGCTG GCGCTACTGACCATCGACTCGGATCTACGCCGGCTGTTCCCGGATATCGAGGTGGTGCGAGTGTTAGGCGATTGCGGCGA CCCGGCGGTCGTGGCGCATGCGTTGAACACTGCCACGCCGGACGCGGTCTTCCATGCAGCCGCGTACAAGCAGGTGCCGT TGCTGGAAGAGCAGTTGCGCGAGGCGGTGCGCAACAACGTCCTGGCGACCGAGAACGTGGCGCGCGCCTGCCAGCGTGCA CGTATCGAAACCTTCGTCTTCATCTCCACCGACAAGGCGGTCGAGCCGGTCAACGTGCTGGGCGCAAGTAAGCGCTATGC AGAAATGATCTGCCAAAGCCTTGACGCGCGCGATGCGCCGACGCGCTTCATCACCGTGCGCTTCGGCAACGTGCTGGATT CGGCCGGCAGCGTGGTGCCGTTGTTCCGCGAACAGATCCGCCAGGGCGGCCCGGTAACCGTGACGCATCCGGATGTGACG CGTTACTTCATGACCATCCCCGAAGCCTGCCAGTTGGTCATCCAGGCGGCTGCATCTGCGTCGCATGGTGCGATCTATAC ACTGGACATGGGCGAGCCGGTGCCGATTCGACTGCTTGCCGAGCAGATGATCCGTCTGGCCGGCAAGCAGCCAGGCAAGG ACGTGGCGATTCTCTATACCGGCCTGCGTCCGGGCGAGAAGTTGCACGAGACGCTGTTCTATTCCGACGAGGCCTATCGC CCCACCGCGCACCCCAAGATCCTGGAGGCCGGTGTGCGCGAGTTCTCGCATGAGCAGGTGCTGCAGCTGGTGATGCGCTT GCGCGAGGCCGTTAACCGCTACGACATCAAAGCGATGGAGACTGTATTGGGCAGCCTGATGCCGGATTTCGCGGCTGCTC GACGGAAAGTCGACGCGCGATCTGATACGGTCGTTCCATTCCCCGCACGTGAGGTCAGAAGACTGTAA Protein sequence : MISWRDRLTKALPQIAVVVHDLLMVWVCWQLLHAGRYSMLRDAPNLPLWDWRTAVVLVAQGLVFWKMGLYRGLWRFASVP DLWNIFKASFLGLVAIVLALAYDRLDGVPLSVLVVYPFALSALLGTPRLLYRAWKDYQIAHSGDAAQRVLILGAGRAAEG LVRDLRRTGAFVPVGYLDDANNLHGAKIQGLNVLGNLDQAAAIAKETAAKLLVIAIPSLDASGMQRVVAICESTGLPFRM VPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIGSEVCRQCARHGARRIVLLEIDEL ALLTIDSDLRRLFPDIEVVRVLGDCGDPAVVAHALNTATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRA RIETFVFISTDKAVEPVNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTHPDVT RYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVAILYTGLRPGEKLHETLFYSDEAYR PTAHPKILEAGVREFSHEQVLQLVMRLREAVNRYDIKAMETVLGSLMPDFAAARRKVDARSDTVVPFPAREVRRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 8e-80 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-73 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XCAW_01958 | YP_007649947.1 | Nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 7e-77 | 43 |
