Gene Information

Name : XCAW_01946 (XCAW_01946)
Accession : YP_007649935.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Hypothetical Protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2150049 - 2150981 bp
Length : 933 bp
Strand : +
Note : -

DNA sequence :
ATGATGGGCCTGCGCAAACTCCGAGGGACCGTCGCCTGCGTTCTGCTGGCGAGCACCGGACCGTCCTTCGCGCTCAACAC
GGCGAGCATCGTGACCGCTGCCCTGTCGCCCGACTGCCTGGCCTATCGCATCGCGGGCATCTGCTACTGGCTCTACTGCA
CATCGAGCGGCTGCACCGTCCGCACGTCGGTCAAGGTACGGCACTACGTCCCGGATGCGGTCGTCTCCAGCTACAGCAAC
ACCGGGGCCAACCCCTGGGTCGAAGTGCGCGCCATGAGTACGCCCAACCCCACCGCCCAGGCCGGCGGCGACGGCACGAC
GAACGAGGAGCATGAGAACAACCTTGCCAAGTTCAAAAACGCCGACGTGATCGGCCATCCGGCGGGCGCCGTTTTCAGCG
CATTCGCCAGCCGCTCGGGATACACCTGCGAGGGGGCGGGAACGCCGTTCGTTCCCTACCTGCTCAGCACGTTCGACACG
CTGGCCTGGCGGTACAACGTGCCGGAGGCGGCGTACCCCGAATCGCTCACGCCCGGCGTGCGGGAAATTGGCTCGCGGCT
CACGGCCAACCTGTGGGGCAACGTCTATCCACGGGGTGGCTTCCTGCACCAGACCCACGACTACTGGAGCGGCGCCGTGG
TTGCGCAACGGGCCGGGGACGTGGTGACGCGCACCGGGCAGCCCCACGTGTACCAGCCGCTGCTCGCGAGTTCCTATGCA
GGCTATTGGCCCGCCGGGCCGCTGGTGGAGAGCAATCCCGATTCGGGCAAGTGGCAGGAGCTGACCCCTACCCTGTCGAG
CCGCTGCGCGGTGTTTCCGCATTCCGGGCCCTTCGTGCAGGCGCAGCAGGGCGACTACGCCTGGGCGCTCTGGCGCCCGT
ACAGCTGCTGCCAGCGGCGCGGCCAGGTCTTCCTCGGCAGCGTGGATTTTTGA

Protein sequence :
MMGLRKLRGTVACVLLASTGPSFALNTASIVTAALSPDCLAYRIAGICYWLYCTSSGCTVRTSVKVRHYVPDAVVSSYSN
TGANPWVEVRAMSTPNPTAQAGGDGTTNEEHENNLAKFKNADVIGHPAGAVFSAFASRSGYTCEGAGTPFVPYLLSTFDT
LAWRYNVPEAAYPESLTPGVREIGSRLTANLWGNVYPRGGFLHQTHDYWSGAVVAQRAGDVVTRTGQPHVYQPLLASSYA
GYWPAGPLVESNPDSGKWQELTPTLSSRCAVFPHSGPFVQAQQGDYAWALWRPYSCCQRRGQVFLGSVDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 6e-116 77
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-114 76
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 9e-99 67
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 1e-93 66
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-92 64
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 9e-95 63
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 1e-76 50
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 1e-76 50
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 5e-64 49
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 1e-69 49
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 2e-69 48
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 1e-63 47
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 2e-57 46
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 3e-63 46