Gene Information

Name : XCAW_01937 (XCAW_01937)
Accession : YP_007649926.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Hypothetical Protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2140995 - 2143166 bp
Length : 2172 bp
Strand : +
Note : -

DNA sequence :
GTGCGCGCCGAGCGCCTCGGCGCGGCCGACGTCCATGCCTGGCTGCTGCGCTGGTTCAACCCGTGCCCGACACTGCTCGG
CGACACCGCCCTGGACCGGGAACGCTTCTACGAGCTGACGCGCTATCCGGAAGCAACCGAGGCAACCGAACAAGTCGAGG
AAGGCGAGATCGAACTCGCGAGCGGCACAGATTTCGCGCAACGCCTTTTTTTCGGCGCGCCGCGCTCCGACGTCGCGCAT
GGGCTTTGGTGGTTCGACGGCATGCCGCACCGCGCGGTGGTGATGGACCTCCTGCGCAACGCGCCGGGCACGGGGCACCT
GACCGGTGAGACGCGCAAGGGTGATGCGATCAACGCGCTCTTCGACCAAATGCCCGAGGACACGGTGATGTGCCTGACGC
TGGTCGCGACGCCGCAGGACGTGCTCGAATCCCACCTCAACCATTTGGCCCGCAAGGCCGTGGGCGAGACCCTGGCGTCC
GAGCAGACGCGCCGTGATGTGCAGGAAGCGCGCGGGCTGATCGGCAGCGCACACAAACTTTATCGCGGCGCCCTCGCCTT
CTACCTGCGCGGCCGGGATCTGGAGCAGCTGGACGAGCGCGGCGTGCAACTCGCGAACGTGATGCTGGGCGCCGGCCTGC
AGCCGGTGCGCGAGGACGACGAGGTGGCGCCCCTCAACACCTATCTGCGCTGGCTGCCCTGCGTGTTCGATCCGGCGAAG
GACACGCGCCAGTGGTACACGCAGCTCATGTTCGTGCAGCATGCGGCCAACCTCGCGCCCGTCTGGGGACGCGGCCGGGG
CACGGGCCATCCTGGCATCACGCTGTTCAACCGCGGAGGCGATGCGGTCACCTTCGATCCGCTCAACCGGCTGGACCGGC
AGATGAACGCGCATCTGTTCCTGTTCGGCCCCACCGGCTCGGGCAAGAGCGCCACGCTCAACAACCTGCTCAACCAGGTG
ATGGCGATCTACCGGCCGCGTCTTTTCGTGGTCGAGGCGGGCAACTCCTTCGGGCTGTTCGGCGACTTCGCGGCGCGCCT
TGGCCTCACGGTGAACCGCGTGCGGCTCGCCCCGGGCGCGGGCGTCAGCCTGGCCCCGTTCGCCGACGCGCGGCGCCTGG
TGGACACGCCCAGCCAGGTCCGCACACTCGATGCCGATGCCCTCGACGAGGCACCGGAGTTACAAGGCGCCGCGCCGGAA
GGCGACGAGCAGCGCGACGTGCTGGGCGAGCTGGAGATCACCGCCCGGCTGATGATCACCGGAGGCGAGGACAAGGAGGA
AGCGCGCATGACGCGCGCGGACCGCAGCCTGATCCGCCAGTGCATCCTCGACGCCGCCCGCCAGTGCCCTGCGGCCGGCC
GCACCGTGCTCTCGCGCGACGTGCGCGATGCGCTGCGCGAGCGCGCGGGCGACCTCAACCTGCCGGACACCCGGCGCGCG
CGCCTGCTGGAGATGGCGGACGCGATGGACATGTTCTGTCAGGGCGCGGACGGCGAGATGTTCGACCGCGCCGGCACGCC
CTGGCCCGAGGCCGACATCACCATCGTGGACCTCGCCACCTTCGCCCGCGAGGGCTACAACGCGCAGCTGTCGGTAGCCT
ACATCTCCCTCATCAACACCGTGAACAACATCGCCGAGCGCGACCAGTTCCTCGGCAGGCCGATCATCAACGTGACCGAC
GAGGGCCACATCATCACGAAGAACCCGCTGCTCGCGCCCTACGTGGTGAAGATCACCAAGATGTGGCGCAAGCTCGGCGC
CTGGTACTGGCTGGCCACCCAGAACCTCGACGACCTGCCCCGCGCCGCCGAGCCCATGCTCAACATGATCGAGTGGTGGA
TCTGCCTGTCGATGCCGCCCGACGAGGTGGAGAAGATCGCGCGGTTCCGCGAACTCAACGCCGCGCAGAAGGCGCTGATG
CTGTCTGCCCGCAAAGAGGCAGGCAAGTTCACCGAGGGGGTCGTCCTCTCGAAGTCCATGGAACTGCTCTTCAGGGCGGT
GCCGCCCAGCCTGTACCTCGCCATGGCGATGACCGAGCCCGAGGAGAAGGCCGAGCGCTTCGCGCTGATGCGGGAGCACG
GCATCAGCGAACTGGATGCCGCGATCCTCGTCGCAGAGCGGATCGACCGCGCGCGCGGCATCGAGCCGCTGGCGCACCCT
TCCCTGGACTGA

Protein sequence :
MRAERLGAADVHAWLLRWFNPCPTLLGDTALDRERFYELTRYPEATEATEQVEEGEIELASGTDFAQRLFFGAPRSDVAH
GLWWFDGMPHRAVVMDLLRNAPGTGHLTGETRKGDAINALFDQMPEDTVMCLTLVATPQDVLESHLNHLARKAVGETLAS
EQTRRDVQEARGLIGSAHKLYRGALAFYLRGRDLEQLDERGVQLANVMLGAGLQPVREDDEVAPLNTYLRWLPCVFDPAK
DTRQWYTQLMFVQHAANLAPVWGRGRGTGHPGITLFNRGGDAVTFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNLLNQV
MAIYRPRLFVVEAGNSFGLFGDFAARLGLTVNRVRLAPGAGVSLAPFADARRLVDTPSQVRTLDADALDEAPELQGAAPE
GDEQRDVLGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAARQCPAAGRTVLSRDVRDALRERAGDLNLPDTRRA
RLLEMADAMDMFCQGADGEMFDRAGTPWPEADITIVDLATFAREGYNAQLSVAYISLINTVNNIAERDQFLGRPIINVTD
EGHIITKNPLLAPYVVKITKMWRKLGAWYWLATQNLDDLPRAAEPMLNMIEWWICLSMPPDEVEKIARFRELNAAQKALM
LSARKEAGKFTEGVVLSKSMELLFRAVPPSLYLAMAMTEPEEKAERFALMREHGISELDAAILVAERIDRARGIEPLAHP
SLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 83
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 82
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 69
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 65
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 65
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 65
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 55
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 2e-179 54
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 54
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 6e-175 53
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 2e-173 53
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 4e-174 51