Gene Information

Name : XCAW_01934 (XCAW_01934)
Accession : YP_007649923.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Hypothetical Protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2138224 - 2139696 bp
Length : 1473 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAGTAACGGCCTGCTCAAGTGGCTGATGATTCCCGTGGCAGCGCTGCTGGTCTTTCTTGGCATCCACCTCACGTC
CGGACGCTCGGACCAGTCCGCCGCGGGCGGAGGCACCGCCCAGCTCACACCCGAGGAAATGAAGGCGCTCGGCATCGACG
GCGACACGCCGCGCGACACCGTGGCGACGCTGGTCGCGCAAGTGAAGCAGCTGCGCGGCGAATTGCAAACGGCCATGGGC
GACAACAAGAACCAGCGCGCGGAGAATGAGCGACTTCGCCAGCGCGACAGCTCCATCGACCAGCGCATCCAGTCCGCGCT
CGACGGCGAGCGCGGCCGCCTGCTGCAGGAACGCGAGCAGGCGGTCGGTGACAAGCAGCAGACGCAGGGCATGCTGCAGG
AACTGCAGCACAAGCTCGACCAACTCGGCGGCAAGGGCGGCTCCACCGACCTGCCGGTCGGCCTCGGCCTGGAGGAAGGC
GACGGCAAGGGCTTCGGTGCCCAGGGCGCCCCGGGCGTCCGCTGGGTGGAGCCCGACGATGCGCGTCCCGACGCCGGCAA
GGGCCCTGCGGGGGCTTCGGGAAAGGGGGAACGATTTCCGATGCGGTTCGGGCCGGCCGATGGTGGCACTCCCGGCGGCG
GCTCCGTATCGGCACCCGAATCCAAGGCCGGCGCGGAGCCTAAGCCCGCCAAGCCGGTCTTCACGGTCCCCACGAATGCG
ACGCTCATGGGGTCGGTGGCGATGACGGCTCTGATCGGCCGCGTGCCCATCGACGGCACGGTGAACGACCCCTACCCGTT
CAAGGTGCTCATCGGCCCCGACAACCTCACGGCCAACGGCATCGATCTGCCGGAAGTAGCGGGCGCCGTGGTGAGCGGCA
CGGCCTCCGGCGACTGGACGCTCTCTTGCGTGCGCGGCCAGATCCGCTCGGTCACCTTCGTGTTCCGCGACGGCACCATC
CGCACGGTCCCCGACGAGAAGGGCCAGGGCGGCACCAGCGGCAACCGTGGCAACGCGGGCAACGGCACTGCCGCCGATGG
ACAGGGCCCGATCCTTGGGGGCCTCGGCTGGATCAGCGATCCGCACGGCATCCCCTGCGTGAGCGGGGAGCGGCGCAGCA
ACGCGCAGCAGTACCTGGGCTCGCAAGCGCTCATCACGGCCGCCGGGGCGGGCGCGGCTTCGCTCATCAAGAGCGACAGC
GGCAGCGTTGCGGTGGTGAGCAACGGCAACGGCTCGCTGGGCACCGTGGGCATCTCCGGCAACGAGGCCATGGGCCGCAT
TTTGGCCGGTGGCGTGCAGGAGATGTCGCAGTGGGTGAACAAGCTCTACGGCCAGGCCTTCGCCGCGGTGTACGTGCCGC
CCGGCGCCCAGGTCGCCGTCCACCTCGAACAACCCTTGCAGATCGACCACGACGCCCAGGGCCGCAAGGTCCGCCACGCT
ACCGGAGGAAGCCATGCGATCGACCTGGACTGA

Protein sequence :
MKSNGLLKWLMIPVAALLVFLGIHLTSGRSDQSAAGGGTAQLTPEEMKALGIDGDTPRDTVATLVAQVKQLRGELQTAMG
DNKNQRAENERLRQRDSSIDQRIQSALDGERGRLLQEREQAVGDKQQTQGMLQELQHKLDQLGGKGGSTDLPVGLGLEEG
DGKGFGAQGAPGVRWVEPDDARPDAGKGPAGASGKGERFPMRFGPADGGTPGGGSVSAPESKAGAEPKPAKPVFTVPTNA
TLMGSVAMTALIGRVPIDGTVNDPYPFKVLIGPDNLTANGIDLPEVAGAVVSGTASGDWTLSCVRGQIRSVTFVFRDGTI
RTVPDEKGQGGTSGNRGNAGNGTAADGQGPILGGLGWISDPHGIPCVSGERRSNAQQYLGSQALITAAGAGAASLIKSDS
GSVAVVSNGNGSLGTVGISGNEAMGRILAGGVQEMSQWVNKLYGQAFAAVYVPPGAQVAVHLEQPLQIDHDAQGRKVRHA
TGGSHAIDLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-146 66
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 9e-130 64
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 6e-107 49
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 2e-100 48
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-100 48
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 6e-97 48