Gene Information

Name : XCAW_01933 (XCAW_01933)
Accession : YP_007649922.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Hypothetical Protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2137242 - 2138234 bp
Length : 993 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCGCACCCATCCCTCTACTCCCCTGTTGGCATTCGCTCTGTGGGCGACGCTCTGGCTGGGCGATACGCCCACGGC
CCATGCGGTGCAGATCCTGCGCTGGGAACGCATGCCGCTCGCGGTACCTATGCGCGTGGGCGAAGAGCGCGTGGTCTTCA
TCGACCGCAACGTGCGCGTGGGCGTGCCCAACGCGATCGCCGATCGGCTGCGCGTGCAGAGCGCGGGCGGCGCGATCTAC
CTCAAGGCGAGCGAGGCAATAGAGCCCACGCGGCTGCAGCTGCAGGACGCCGACAGCGGCGCGCTGGTCCTGATCGACAT
CGCCGCCGAACCGGCCCAGGACGGCCAGGCGCCGCTGGCGCCGGTGCGCATCGCCTTCGGCGATGCGCCCGGGCCGCGCT
ATGGCGCGGGCGACCGGGCATCAGACACCGACACAGGTTACGACGGGCAACCCGCCGATGCGCTCTCGCCCGATGCATCC
CAGCGCCTGCGCCACGAAACGCCGGTCGCCGTGGTGCTCACCCGCTATGCGGCGCAGAGCCTCTATGCGCCGCTGCGCAC
CGTGGAGTCCGCGCGCGGGGTGACCCCGGCGCGCCTGCGCCGCGGGCTCGATCTGGACACGCTCGCGCCCGCCCTGCCGG
TGCGCGCGCAGGCGCTGGCCGCCTGGCGCCTGGACGACCAATGGGTGACCGCGATCCGCCTGACCAACACCTCGCCGCGC
TGGGTGGACCTCGACCCGCGCATGCTCATCGGCGATTTCGTTGCGGCCACGTTCCAGCACCCGGGACTGGGACCGGCGGG
CGATGCGACCGACACCACCGTGCTCTATCTGGTGACGCGCGGCCGCGGACTGGGCGAGGCGCTGCTGCCGCGCATCAGCC
GCATCGACGCGGCGCGGAACCTGCCGGCGCCCGCGACCGAGCACTCGACCGAGCCCGCGCCCGTTCCAGCGGTCGCACCG
CAGCCGCCTTCGGGAGCCCCCCATGAAAAGTAA

Protein sequence :
MKRTHPSTPLLAFALWATLWLGDTPTAHAVQILRWERMPLAVPMRVGEERVVFIDRNVRVGVPNAIADRLRVQSAGGAIY
LKASEAIEPTRLQLQDADSGALVLIDIAAEPAQDGQAPLAPVRIAFGDAPGPRYGAGDRASDTDTGYDGQPADALSPDAS
QRLRHETPVAVVLTRYAAQSLYAPLRTVESARGVTPARLRRGLDLDTLAPALPVRAQALAAWRLDDQWVTAIRLTNTSPR
WVDLDPRMLIGDFVAATFQHPGLGPAGDATDTTVLYLVTRGRGLGEALLPRISRIDAARNLPAPATEHSTEPAPVPAVAP
QPPSGAPHEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-85 64
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-71 60
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 7e-72 60
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-66 59
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 3e-71 58
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 4e-75 54
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 4e-50 47
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 4e-50 47
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 6e-51 46
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 7e-51 46
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 2e-50 46
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 8e-50 45
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 4e-42 42