Gene Information

Name : xerC (XCAW_01726)
Accession : YP_007649721.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1923939 - 1925195 bp
Length : 1257 bp
Strand : -
Note : -

DNA sequence :
ATGGCACTCTCTGATCTGACCGTGCGGCAAGCCAAAGCCGCCGAGAAAACCTACAGCATCCCTGACACCGACGGCCTCGG
CCTGGTGGTCGCTCCAACCGGCGGCAAATCGTGGCATCTGCGCTACTACTCGCTCGGCAAGCAAAAGCGCATCTCTTTGG
GCAACTACCCCGAGGTCGGACTGCGCGAAGCACGCACCTTGCGTGATGAAGCCCGAGCGCTCGTGGCGAAGGGCATCAAT
CCACATACTGACCGCAAACAGAAGCGACGCGCTATCAAGCTAGCCTCGGACTACACGTTCAAGGCCGTCTTCGATGCCTG
GGTCGAGCATCGCGCGAAGGAACTCAAGGAAGGCAGAAACAGCACGCTGTCGCAGATCCAGAGAATCTTCGGAAAGGATG
TGCTGCCCAGCCTTGAGAGGATGTCGATCTACGACATTCGCCGACCTCAACTCTTGGGCGTCCTAGCCCGGATCGAGCGG
CGCAAGGCTTTCACCACTGCCGAGAAGGTCCGCACCTGGCTGAGCCAGTTGTTCCGCTACGCCCTGGTCATTGTAGAGGG
CATGGAGGCTAATCCGGCCACCGACCTCGACGTGGTGGCCGAGCCCAAGCCGCCGGTGAGCCACAATCCCTACCTGCGTC
TGCCCGAACTGCCCGACTTCCTCCAGAAGCTCAGGCTCTACAACCCGCGTGGCTGGCAAACGCAACTCGGCATTCGACTG
CTGTTCCTGACCGGGGTGCGTACCGGCGAACTGCGACTGGCTACACCGGACCAGTTCGACCTCGACCGCGGTCTGTGGAT
TATTCCGCCGCAGATCGTCAAGCAGCTTCAGGACGAGATGCGCAAGGCCGGCAAGCGCCCGCATGACATACCGCCTTACA
TCGTGCCTCTGTCTGTCCAGGCGGTCGAGATAGTGCGCTACCTCCTGGGCGTAATGCGGCCTGCCCAGAAGCATCTGCTG
GCGCACCGCAGCGAACTTGTTAGCGCCGATGTAAAACTGACCCACAGCGCCGAAGTAAAAGTGACCCACCTGGGCCACGA
TGGTGGCCTTTTGAAGGCTGCTGATGTTGACTCAGGAGCAGGCAGTGGAGATACGTGTGATGGCCCGCAGGGGCGAGAGT
GTCAGAGCGATCGCGAAGCAATTGGAGTGCTCGCGCAACACCGTGCGCAGGTACCTGCGCGATCAAGATGCGCGGCGGTA
CGGCCCGCGCGAGTCCAGGGCCTGCAAGCTCGACGGCTACCAGTCCTATCTGCGTGA

Protein sequence :
MALSDLTVRQAKAAEKTYSIPDTDGLGLVVAPTGGKSWHLRYYSLGKQKRISLGNYPEVGLREARTLRDEARALVAKGIN
PHTDRKQKRRAIKLASDYTFKAVFDAWVEHRAKELKEGRNSTLSQIQRIFGKDVLPSLERMSIYDIRRPQLLGVLARIER
RKAFTTAEKVRTWLSQLFRYALVIVEGMEANPATDLDVVAEPKPPVSHNPYLRLPELPDFLQKLRLYNPRGWQTQLGIRL
LFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPHDIPPYIVPLSVQAVEIVRYLLGVMRPAQKHLL
AHRSELVSADVKLTHSAEVKVTHLGHDGGLLKAADVDSGAGSGDTCDGPQGRECQSDREAIGVLAQHRAQVPARSRCAAV
RPARVQGLQARRLPVLSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAN62223.1 putative integrase Not tested PAGI-3(SG) Protein 2e-116 66