Gene Information

Name : XCAW_01688 (XCAW_01688)
Accession : YP_007649683.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Hypothetical Protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1891831 - 1894695 bp
Length : 2865 bp
Strand : +
Note : -

DNA sequence :
ATGCGGTGGAAACTCCCTTGGCCCAAGCTGGCCGCCGCAGCAAACGGAAACGACGAGCCGTCTGACGGATGGCTGCGCCA
TGTCGAGGCCTTGCGCCAAGCTGGCCTGCCCGAACCCGGTGCTGCGGTCCAGGGCCACAGGCCGGCGACCGTGGCCGACG
AGCAGGCGCTGTACGACGTTGCGCCGTCCTTTGTGGAACTGCTGCCCTGGGTGGAGTTCCTGCCCGAGTCGAAGTCGATG
CTGCTGGAGGACGGGCAATCGGTGGCAGCCTTCTATGAGCTGGTGCCGTTGGGCACCGAGGGCCGGGAACCCGGCTGGCT
CGCGCATGCCCGCGACGCGTTGGAGAATGCGCTCCAGGACAGCTTCGATGAACTGGATGAGAACCCTTGGGTGCTCCAGC
TCTACGCCCAGGACGAGCCCAGCTTCGACCAGTACATGCAGACCCTGCGCGACTACGTGCGGCCGAGTGCCCGCGATACG
GCATTCACCGAGTTCTACCTACGCTTCTTCAGCCATCACCTGCGCGCGGTGGCCAAGCCGGGCGGCCTGTTCGAGGACAC
CGTGGTCACGCGGCTGCGCTGGCGCGGCCAGACTCGGCGTGTACGGATGGTGGTCTATCGCCGTTCCATCGGACAGACGA
GCCGCCGTGGTCAGACCCCGGAGCAGATGCTCAACATCGTCTGCGACCGCCTGTGCGGAGGACTGGCGAACGCTGGCATC
GAGGCCCGGCGCATGGTCGCCGCAGACATTCACGACTGGCTACTGCGGTGGTTCAACCCGAATCCCAAGTTGCTTGGTCC
TGGTGCCGAGGACCGCGAGCGCTTCTTCGCGCTGGCGCGCTACCCCGACAAAGCTGAGGACGGCGAGATCGAACTGGCGA
GCGGGCGGGATTTCAGCCAGCGGATGTTCTTTGGGCAACCACGTTCCGACGTCGCGCAAGGCGCTTGGTATTTCGACGGG
ATGCCGCACCGCGTGCTCGTCACTGACCGGCTTCGCATGCCACCGGGCACGGGGCACCTGACCGGCGAAACCCGCAAGGG
CGATGCGATCAACACGCTGTTCGACCAGATGCCCGAAGACACGTTGATGTGCCTGACGATGGTCGCCACGCCGCAGGACG
TCCTCGAATCAGACCTGAACCACCTGGCGAGAAAGGCTGTGGGCGAGACGCTTGCGTCCGAGCAGACGCTCAAGGATGTG
CATGAGGCGCGCTCGATGATCGGCAGCGCGCATAAGCTCTACAGAGGCAGCTTGGCGTTCTATCTGCGTGGGCACGACGA
AGCAGAACTGGACCGGCGCGGCCTCGATCTCGCGAACGTGATGCTCAACGCCGGCTTGCAGCCGGTGCGCGAGGAAGACG
AGGTGGCGCCGCTCAACAGCTATCTGCGCTGGCTGCCGTGTTGCTACAACCCTGGCCTGGATCGGAAGAAGTGGTACACG
CAACTGATGTTCGCGCAGCATGCCGCGAACCTATCGCCGGTGTGGGGGCGCAGCCAGGGCACAGGGCATCCCGGCATCAC
GATGTTCAATCGCGGCGGCGGGCCGATCACCTTCGATCCCCTCAACAGGTTTGACAGGCAGATGAATGCCCACCTCTTCC
TGTTCGGACCGACGGGTTCGGGCAAGTCAGCCACGCTCAACAACCTGCTGAACCAAATCACGGCGATCTACCGGCCGCGC
CTGTTCATCGTGGAGGCTGGCAACAGCTTCGGGCTGTTCGCCGAGTTCGCGCGCAAGCTCGGACTGACTGTCCAACGCGT
GAAGCTCGCACCCGGGGTGGACGTGAGCCTGGCTCCCTTTGCTGACGCACGTCGCCTGATCGAGACGCCGAGCGACGTGC
AGACGCTCGATGCCGATGCGCTGGACGAGGACCGGCCACCCGACGCCACAGAGGCGGACGAGCAGCGCGACGTGCTAGGC
GAACTGGAAATCACCGCACGCCTCATGATCACCGGCGGCGAGGACAAAGAGGAGGCGCGCATGACGCGCGCGGATCGCTC
GCTGATCCGTCAGTGCATCCTCGATGCGGCCGAGCACTGCGTGGCCGATGGGCGCACGGTACTCACGCGCGACGTGCGCA
ACGCGCTTCGCACCCGCGGCCAGGACCCGACGTTGCCGGAAACGCGGCGCGTGCGCCTACTGGAAATGGCCGACGCAATG
GACATGTTCTGCCAGGGCACAGATGGCGAGATGTTCGACCGGCCCGGCACGCCGTGGCCAGAGGCCGACATCACGCTGGT
CGATCTCGCCACCTATGCCCGCGAAGGCTACAACGCGCAGCTCTCCATCGCCTACATCAGCCTGATCAGCACCGTCAACA
ACATCGCCGAGCGCGACCAATACCTCGGGCGGCCGATCGTCAACGTGACCGATGAAGGGCACATCATCACCAAGAATCCG
CTGCTTGCCCCTTACGTCGTGAAGATCACGAAGATGTGGCGCAAGTTGGGCGCCTGGTTCTGGTTGGCGACACAGAACAT
CGACGACTTGCCGCGTGCCGCGGAGCCCATGCTCAACATGATCGAATGGTGGATCTGCCTGTCGATGCCACCGGACGAGG
TGGATAAGATTGCGCGCTTCCGCGAACTCTCGCCCGCGCAGAAGGCATTGATGCTGTCAGCCCGCAAGGAAGCCGGCAAG
TTCACCGAGGGCGTCATCCTGTCCAAGAACATGGAAGTGCTCTTCCGGGCCGTGCCACCGAGCCTTTACCTCGCGCTCGC
GCAAACCGAACCCGAGGAAAAAGCCGAGCGCTACCAGCTCATGCAGCAGTTCGGCATCAGCGAGTTGGAGGCCGCCTTCA
AGGTCGCCGAGAAGATTGACCAGGCGCGCGGCATCGAGTCGCCGACCCTGGACCAGCCCCAATAG

Protein sequence :
MRWKLPWPKLAAAANGNDEPSDGWLRHVEALRQAGLPEPGAAVQGHRPATVADEQALYDVAPSFVELLPWVEFLPESKSM
LLEDGQSVAAFYELVPLGTEGREPGWLAHARDALENALQDSFDELDENPWVLQLYAQDEPSFDQYMQTLRDYVRPSARDT
AFTEFYLRFFSHHLRAVAKPGGLFEDTVVTRLRWRGQTRRVRMVVYRRSIGQTSRRGQTPEQMLNIVCDRLCGGLANAGI
EARRMVAADIHDWLLRWFNPNPKLLGPGAEDRERFFALARYPDKAEDGEIELASGRDFSQRMFFGQPRSDVAQGAWYFDG
MPHRVLVTDRLRMPPGTGHLTGETRKGDAINTLFDQMPEDTLMCLTMVATPQDVLESDLNHLARKAVGETLASEQTLKDV
HEARSMIGSAHKLYRGSLAFYLRGHDEAELDRRGLDLANVMLNAGLQPVREEDEVAPLNSYLRWLPCCYNPGLDRKKWYT
QLMFAQHAANLSPVWGRSQGTGHPGITMFNRGGGPITFDPLNRFDRQMNAHLFLFGPTGSGKSATLNNLLNQITAIYRPR
LFIVEAGNSFGLFAEFARKLGLTVQRVKLAPGVDVSLAPFADARRLIETPSDVQTLDADALDEDRPPDATEADEQRDVLG
ELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAEHCVADGRTVLTRDVRNALRTRGQDPTLPETRRVRLLEMADAM
DMFCQGTDGEMFDRPGTPWPEADITLVDLATYAREGYNAQLSIAYISLISTVNNIAERDQYLGRPIVNVTDEGHIITKNP
LLAPYVVKITKMWRKLGAWFWLATQNIDDLPRAAEPMLNMIEWWICLSMPPDEVDKIARFRELSPAQKALMLSARKEAGK
FTEGVILSKNMEVLFRAVPPSLYLALAQTEPEEKAERYQLMQQFGISELEAAFKVAEKIDQARGIESPTLDQPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 93
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 79
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 67
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 63
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 62
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 62
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 53
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 53
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 53
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 52
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 52
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 49