Gene Information

Name : XCAW_01686 (XCAW_01686)
Accession : YP_007649681.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Hypothetical Protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1889977 - 1891407 bp
Length : 1431 bp
Strand : +
Note : -

DNA sequence :
ATGCGCAGTAACGGACTCCTGAAGTGGCTGATGATTCCTGTGGCCCTGCTGGTGCTGTTCTTCGGCATTCGGCTGTTCTC
GGGCGGAGGGTCGTCGGCACCCTCGCAAGCCGAGACGGGTAGCCAACTCACGCCCGAAGAAATGAAGGCATTGGGCATTG
CAGGCGATACCCCGCGCGACACCGTGGCAACGCTCGTCGCCCAGGTAAAGCAACTGCGCACCGAGCTTCAGACCGCGCTG
TCTGATAACAAGTCCCAGCGCGAGGAGAACCAGCGGCTGCGCCAGCGCGAGAACTCGATCGACCAGCGCATCAACTCGGC
GCTGGAGACCGAGCGCTCCAACCTGCGCCGCGACCAGCAACAGGCGGCCAGTGAACGCCAGCAGACCGAGGGCCTGCTCG
CCGACTTGCAGCAGCGTCTGGACAGCATCGGCGGACGCGGGGGCGGCGATACAGATATGCCTGTGGGCCTGGGGCTGCGC
GACGGCGACGAGGCCGGAATGGAAGGCGGCATGCGCTGGGTGGATCCAGACGATAAGAAGCCCGTCGATGGACGCAATGG
CAACCGTGGCACGGGTGGCGGCAACAACTTCCCGACGAGCTTCGGCCCGGCGCAGAGCACGCTGGACACCACGGCGGAAA
CCGTGCCGAAGGCGAGTGAGGGCTCCGCCCGGGCCAAAAGCACCAAACCCGTCTATACAGTGCCGACGAACTCGACGCTC
ATGGGGTCGGTGGCGATGACGGCGCTGATTGGCCGCGTCCCGATCGACGGAACCGTGAACGATCCGTACCCCTTCAAAGT
CCTCGTCGGCCCCGACAATCTCACCGCCAACGGCATCGACATTCCTGACGTGGCCGGTGCGGTCTTCAGCGGCACGGCTT
CGGGGGACTGGACGCTGTCATGCGTGCGCGGCCAGGTGCGCAGCATCACCTTCGTCTTTCATGATGGAACGATCCGCACG
ATCCCCGAGGACCGCGAGGGCAATCAGCAGAACAACCAGCAGCAGAACGCTCAAAGTGGGGGCCTGGGCTGGATCAGCGA
TCCCTACGGCATCCCGTGCGTCGGCGGAGAGCGGCGCAGCAATGCGCAGCAGTACATCGGCTCGCAAGCCCTCATCACGG
CGGCCGGCGCCGGCGTGGCCTCGCTTATCCAAAGCGACAGCGGCCAGATGTCCTACGTGGGCTCGGACGGCTCTATTGGC
ACCGTGGGCATCAGCGGTCAGGAAGCGGTCGGCCGGATTCTCGCAGGCGGTGTCAAGGAGATGTCGAACTGGGTCAACAA
GCTGTACGGCCAGGCATTCGCCGCAGTGTATGTCCAGCCCGGCGCCAAAGTCGCCGTCCACCTCGACAAGCCGCTCGCCA
TCGACTTCGATCCCGAAAGTCGCAAGGTTGATCACCGCGCAGGAGAAAACCATGCTCTCGAACTTGACTAA

Protein sequence :
MRSNGLLKWLMIPVALLVLFFGIRLFSGGGSSAPSQAETGSQLTPEEMKALGIAGDTPRDTVATLVAQVKQLRTELQTAL
SDNKSQREENQRLRQRENSIDQRINSALETERSNLRRDQQQAASERQQTEGLLADLQQRLDSIGGRGGGDTDMPVGLGLR
DGDEAGMEGGMRWVDPDDKKPVDGRNGNRGTGGGNNFPTSFGPAQSTLDTTAETVPKASEGSARAKSTKPVYTVPTNSTL
MGSVAMTALIGRVPIDGTVNDPYPFKVLVGPDNLTANGIDIPDVAGAVFSGTASGDWTLSCVRGQVRSITFVFHDGTIRT
IPEDREGNQQNNQQQNAQSGGLGWISDPYGIPCVGGERRSNAQQYIGSQALITAAGAGVASLIQSDSGQMSYVGSDGSIG
TVGISGQEAVGRILAGGVKEMSNWVNKLYGQAFAAVYVQPGAKVAVHLDKPLAIDFDPESRKVDHRAGENHALELD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 88
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 8e-138 70
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 9e-104 49
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 3e-102 47
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-102 47
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 6e-98 47
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 3e-75 41
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 7e-76 41