Gene Information

Name : XCAW_01672 (XCAW_01672)
Accession : YP_007649667.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Hypothetical Protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1878413 - 1880692 bp
Length : 2280 bp
Strand : +
Note : -

DNA sequence :
ATGTCCCTCGATCTTGAATCTACTGCTGCACAAGCCACGCCCGTGCAGAGCGAACTGCTCGACGCGGAATCTTCCCCTTT
GACCCTGAGCCTTCAGGATTTCGTTGGTGAGTTCGGCGACGAACTGCTCGACTCCCTCAATCGCGCCAACCCGCCGGTCT
ATACGGGTCAGCCGCAAACGCGCCGTCAGCTCATCGTCGCCAGCCTCAAGCGCAAACTGTTTGAGGCCCAGGCGGAAGTC
GTCCATGCCGCCGCCGAGTTGCTGATCGACCGTGGCGAACGCGCCGCGATCGTCAACGGCGAGATGGGTTGCGGCAAGAC
GACCGTCGGCATCGCCACGGCCGCCGTTCTCAACGCCGAGGGCTACCGCCGCACCCTGGTTCTTTCGCCACCGCATTTGG
TTTACAAGTGGCGGCGCGAGATCCAGGAGACAGTGGCCGGCGCCAGGGTCTGGGTACTCAACGGCCCCGACACGCTGGTC
AAACTCATCAAACTGCGCGAGCAGTTGGGTGTGCAGCCCACGGGCCAGGAGTTCTTCGTCCTTGGGCGTGTGCGGATGCG
GATGGGCTTCCACTGGCGGTCCGTCTTCACCCGGCGGCGCACCCGCCACGGCGACGTGGCAGCCTGCCCGGACTGCGGCC
ATGTCATCACAGACCTCGACGGCGAGCCGGTCAATCCGATCGAACTCGACGCCGAGGAGTACCGCAGGAAGTGCAGCCAT
TGCGCCGCCCCCCTGTGGACGCTGACCCGCCCGAGAAGCCTGTCCGGTAGCGACCAGTCTTCGGCCGTCCTCAAAGCCTT
GAAACGGATTCCCACGATCGGGGAAGTCACCGCGCAGAAGCTCATGAAACGCTTCGGTGATGGCTTCCTCGCCTCGATGT
TGGGAGACAACGTGCATGAGTTCATCAATCTCATGGACGGCAACGGTGAGCTGGTGTTTTCCGACCGCCAAGCCACCCGC
ATGGAACGGGCGATGGCGAATATGGAGTTCGGGTTTGGCGAGGGTGGCTACCAACCGTCCGAGTTCATCAAACGCTACCT
GCCGCAAGGCACGTTCGACCTGCTCATCGCTGATGAAGCGCACGAGTACAAGAACGGCGGCAGTGCCCAGGGCCAGGCCA
TGGGCGTGCTGGCGGCGAAGTCGCGCAAGACGCTGCTCCTCACCGGCACCTTGATGGGCGGCTACGGCGACGACCTGTTC
TACCTGCTGTTCCGCGCCCTGCCTGGGCGGATGATCGAAGACGGTTACCGCCCGACCACGAGCGGCAGCATGGCCTCGGC
CGCGATGGCGTTCATGAGGGACCACGGAGTCCTCAAGGATATTTATTCGGAAAGCACAGGTACGGCGCACAAGACCGCGA
AAGGCTCGAAAGTCAGTGTCAGAACGGTCAAGGCCCCAGGTTTCGGCCCCAAGGGCGTGCTGCGCTGCATCCTGCCGTTC
ACGGTCTTCCTCAAGCTCAAGGACATCGGTGGCAACGTCCTGCCTCCGTATGACGAGGAGTTCCGTGAAGTCGCGATGGA
CACGGCACAAGTCGCGGCCTACCGCGACCTGGCGGGTCGGCTGACCGCAGAGCTGAAGCAGGCTCTGGCGCGACGCGATA
CGACTTTGTTGGGGGTGGTCCTCAACGTACTGCTGGCCTGGCCGGATTGCTGCTTCCGGTCGGAGACCGTGTTACATCCG
CGCACGCGCGACACCTTGGCGTTCGTCCCGGCTCAGTTCCACGAGTTCGAGATCACCCCCAAGGAGCGTGAGCTGATCGA
CATCTGCAAGCAGGAGAAGGCGCAGGGGCGCAAGGTCCTGACCTACACGGTCTATACCGGCAAGCGCGACACCACGTCAC
GCCTGAAGGTGCTGCTGGAGCAGGAAGGCTTCAAGGTGGCGGTGCTGCGCGCGAGCGTAGATGCCAGCCGCCGTGAAGAC
TGGATCGCCGAGCAGTTGGACCGCGGCATCGATGTGCTCATCACCAACCCCGAACTCGTCAAGACGGGATTGGACCTGTT
GGACTTCCCGACGATCGTGTTCATGCAGTCGGGCTACAACGTGTACTCGCTCCAGCAAGCGGCACGCCGCTCCTGGCGCA
TCGGGCAGAAAGAACCCGTGCGAGTTATCTATCTCGGCTACGCCGGCTCCTCGCAGATGACCTGCTTGGAGTTAATGGCC
AAGAAGATCATGGTATCGCAGTCCACCTCGGGCGACGTGCCCGAATCGGGGCTGGATGTCCTGAACCAGGATGGTGATTC
CGTCGAGGTCGCATTGGCCCGACAGCTTGTCGCCGCCTGA

Protein sequence :
MSLDLESTAAQATPVQSELLDAESSPLTLSLQDFVGEFGDELLDSLNRANPPVYTGQPQTRRQLIVASLKRKLFEAQAEV
VHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGARVWVLNGPDTLV
KLIKLREQLGVQPTGQEFFVLGRVRMRMGFHWRSVFTRRRTRHGDVAACPDCGHVITDLDGEPVNPIELDAEEYRRKCSH
CAAPLWTLTRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMKRFGDGFLASMLGDNVHEFINLMDGNGELVFSDRQATR
MERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKSRKTLLLTGTLMGGYGDDLF
YLLFRALPGRMIEDGYRPTTSGSMASAAMAFMRDHGVLKDIYSESTGTAHKTAKGSKVSVRTVKAPGFGPKGVLRCILPF
TVFLKLKDIGGNVLPPYDEEFREVAMDTAQVAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVLHP
RTRDTLAFVPAQFHEFEITPKERELIDICKQEKAQGRKVLTYTVYTGKRDTTSRLKVLLEQEGFKVAVLRASVDASRRED
WIAEQLDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQQAARRSWRIGQKEPVRVIYLGYAGSSQMTCLELMA
KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C71 AAN62165.1 conserved hypothetical plasmid protein Not tested PAGI-2(C) Protein 0.0 95
ORF SG81 AAN62302.1 conserved hypothetical plasmid protein Not tested PAGI-3(SG) Protein 0.0 87
RL063 AAP84188.1 plasmid related protein Not tested PAPI-1 Protein 0.0 72
unnamed ABR13404.1 putative helicase Not tested PAGI-5 Protein 0.0 72
pph67 CAI36108.1 superfamily II DNA/RNA helicase Not tested PPHGI-1 Protein 0.0 71
yea AAW83099.1 Yea Not tested GGI Protein 9e-174 50