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Name : topA (XCAW_01652) Accession : YP_007649647.1 Strain : Xanthomonas citri Aw12879 Genome accession: NC_020815 Putative virulence/resistance : Unknown Product : Topoisomerase IA Function : - COG functional category : - COG ID : - EC number : - Position : 1861031 - 1863043 bp Length : 2013 bp Strand : + Note : - DNA sequence : ATGCGGCTGTTCTTGTGCGAGAAGCCTTCCCAGGGCAAAGACATTGGCCGGATTCTCGGCGCCACGCAACGCGGTGAAGG CTGCCTCAACGGTTCCGGCGTCACCGTCACCTGGTGCATCGGCCATCTCGTAGAGGCGGCGGCACCCGAAGCCTACGACG AACAGCTAAAGCGCTGGTCCATCGAGCAGTTGCCCATCATTCCCCAGCGTTGGCAGGTCGAGGTCAAACCGAAAACCGCC ACGCAATTCAAGGTCGTCAAGGCGCTACTGGCGAAGGCAACACAGCTTGTCATCGCCACCGATGCCGACCGCGAAGGCGA ACTGATCGCCCGCGAGATCATTGACCTGTGCGGCTACCGCGGCCCCATCGAGCGGCTGTGGTTGTCGGCACTCAACGATG CGTCCATTCGCGCCGCGCTAGGCAAACTCCGGCCATCGGCCGAGACGCTGCCGATGTACTACTCGGCACTAGCGCGCTCG CGTGCGGACTGGCTTGTGGGCATGAACCTCAGTCGGTTGTTCACGGTGCTGGGTCGGCAAGCCGGCTACGACGGAGTGCT GTCGGTCGGTCGCGTCCAGACCCCGACGCTCAAGCTGGTCGTGGACCGCGACCGCGAGATCGCGGCCTTCGTGTCCGTGC CGTACTGGGCCATCGACGTGTACCTGACCACAAGCGGCCAAGCCTTCACCGCGCAGTGGGTTTCGCCCGACACCTGCACC GACGACTCGGGCCGCTGCCTGCAGCAGCCGGTGGCACAGCAGGCGGCGCAGCAGCTCCGCGCCACCGGCAGTGCCCAGGT TGTCTCGGTCGAAACCGAGCGCGTGCGTGAAGGCCCGCCGCTGCCGTTCGACCTGGGCACCTTGCAGGAGTTGTGTTCCA AGCAGCTTGGGCTGGATGTGCAGGAAACCTTGGACATCGCTCAGGCCCTGTACGAAACGCACAAGGCCACGACCTATCCG CGTTCGGATTCCGGCTACCTGCCGGAGAGCATGTTTGCCGAAGTCCCCATAGTCCTCGACAGCCTGCTCAAGACCGATTT CTCGCTGCGCCCGATCATTGACCAACTCGACCGCACACAACGCTCACGCGCTTGGAACGACGCGAAGGTGTCCGCGCACC ACGGCATCATCCCGACGCTCGAACCGGCGAACCTCTCGGCCATGAGCGAGAAGGAACTGGCGGTGTACAAGCTCATCCGG GCGCACTACCTCGCGCAGTTCCTTCCTCACCACGAGTTCGATCGCACAGTGGCGAACCTCTCTTGCGGCCAGCAGACGCT GACGGCCACAGGAAAGCAGGTGGTCGTCAAGGGCTGGCGCCTGGTGTTGGCCGAACCGCAACCCGAGGAGGATAGCGACA CCGCGGCGCGCAGCCAGGTGCTGCCCGCGCTACGCGAGGGCGTGTCATGCCAGGTAGCAGATGCCGATCTGAAGGCGCTC AAGACACAGCCATCTCGACCCTACACGCAGGGCGAATTGGTCAAGTCCATGAAAGGCGTCGCCAAGCTGATCTCGGATCC GCGCTTGAAACAGAAGCTCAAGGATACGGTCGGCATCGGCACCGAAGCGACACGGGCCAACATTATCAGCGGCCTGATCG CACGCGGCTATCTCATGAAGAAGGGGCGCGCGATTCGCGCCTCGGATGCGGCATTCACCCTCATCGACGCCGTGCCCGCA GCGATTGCCGACCCCGGGACCACCGCCGTATGGGAACAAGCGCTAGACATGATCGAAGCGGGACAACTCACGCTGGACGT GTTCATCGGCAAGCAGGCCGCATGGATTTCGCAGTTGATCACGCAGTACGCCAGCGCGTCCCTGTCAATCAAGGTTCCCC ATGGGCCGGCTTGCCCGCAGTGCGGCGCACCCACGCGCCAGCGCAGTGGCAAGAGCGGCCCGTTCTGGTCGTGCAGTCGC TATCCAGACTGCAAAGGCACGCTGCCGGTCGAGTCCGGCACGTCCAAGCGCGTAGCCTCACGCTCGCGCCGTGGCTGCCG AAAAGACTCCTGA Protein sequence : MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEAYDEQLKRWSIEQLPIIPQRWQVEVKPKTA TQFKVVKALLAKATQLVIATDADREGELIAREIIDLCGYRGPIERLWLSALNDASIRAALGKLRPSAETLPMYYSALARS RADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVYLTTSGQAFTAQWVSPDTCT DDSGRCLQQPVAQQAAQQLRATGSAQVVSVETERVREGPPLPFDLGTLQELCSKQLGLDVQETLDIAQALYETHKATTYP RSDSGYLPESMFAEVPIVLDSLLKTDFSLRPIIDQLDRTQRSRAWNDAKVSAHHGIIPTLEPANLSAMSEKELAVYKLIR AHYLAQFLPHHEFDRTVANLSCGQQTLTATGKQVVVKGWRLVLAEPQPEEDSDTAARSQVLPALREGVSCQVADADLKAL KTQPSRPYTQGELVKSMKGVAKLISDPRLKQKLKDTVGIGTEATRANIISGLIARGYLMKKGRAIRASDAAFTLIDAVPA AIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLITQYASASLSIKVPHGPACPQCGAPTRQRSGKSGPFWSCSR YPDCKGTLPVESGTSKRVASRSRRGCRKDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 89 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 76 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 63 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-166 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 1e-166 | 50 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 7e-167 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 7e-168 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 2e-166 | 48 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 4e-123 | 42 |
