Gene Information

Name : dnaC (XCAW_01626)
Accession : YP_007649621.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : DNA replication protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1830555 - 1831337 bp
Length : 783 bp
Strand : +
Note : -

DNA sequence :
ATGGGCCTGCAGCACGCCCGCATCGCCGAGCTGTGCGAGCAGCTGAAGCTCGTGCGAGTGGGCAACGACTGGCCGGCTCT
CGCACAGGACGCCGCGCGCGACGACGCCAGCTTCGCCGACTTCCTGGAGCGGGTGCTCACGAGCGAGCAGGCTGCCCGCG
AGGAGCGCAAGCGCACGGTGCTGATGCGCCTTGCGACGATCCCGGCCATCAAGACAGTCGAGCAGTTCGACTGGGCCCAG
GCCGGCCGCGCCCCGAAGGCGCAGATCGTCGAGCTCGGCCACCTGGCCTTCGTCGAGCGTCCCGAAAACGTGGTGATGCT
TGGGCCAAGCGGCGTGGGCAAGACCCACATCGCCCTGGCGCTATGCCAGCCCGCCGTCATGGCCGGACACAAGGCACCCT
TCACCCCCGCAGCCGACCTGATGATGCAACTGGCTGCGGCCAAGGCGCAGAACCGGCTCAAGGACTACTTCAACCGCGCG
GTACTCGGGCCGAAGCTGCTGGTGGTCGATGAGACCGGCTACCTGCCGTTCGGGGGCGATGAGGCCAACCTGTTCTTCAA
CGTCGTGGCCAAGCGCTACGAACGCGGCTCGATGGTGCTCACCAGCAAACTGCCGTTCACGCAGTGGCACAGCGCCTTCG
CCGACGACCAGACGCTCACAGCGGCGATGCTCGACCGTCTGCTGCACCATGCCCACATCGTGCAGATCGGCGGAGAGAGC
TACCGGTTGAAGGACAAACGCAAGGCCGGGCAAACGGCCGCGAGGGTGACGGCGACGGCATGA

Protein sequence :
MGLQHARIAELCEQLKLVRVGNDWPALAQDAARDDASFADFLERVLTSEQAAREERKRTVLMRLATIPAIKTVEQFDWAQ
AGRAPKAQIVELGHLAFVERPENVVMLGPSGVGKTHIALALCQPAVMAGHKAPFTPAADLMMQLAAAKAQNRLKDYFNRA
VLGPKLLVVDETGYLPFGGDEANLFFNVVAKRYERGSMVLTSKLPFTQWHSAFADDQTLTAAMLDRLLHHAHIVQIGGES
YRLKDKRKAGQTAARVTATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-63 54
unnamed CAA21402.1 - Not tested HPI Protein 3e-63 54
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-63 54
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-62 54
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-63 54
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-63 54
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-63 54
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-63 54
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 3e-63 54
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 5e-63 54
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 4e-63 54
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 4e-63 54
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-52 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dnaC YP_007649621.1 DNA replication protein VFG1515 Protein 1e-63 54
dnaC YP_007649621.1 DNA replication protein VFG1627 Protein 1e-63 54
dnaC YP_007649621.1 DNA replication protein VFG1606 Protein 1e-63 54
dnaC YP_007649621.1 DNA replication protein VFG1663 Protein 1e-62 54
dnaC YP_007649621.1 DNA replication protein VFG1460 Protein 1e-52 53