Gene Information

Name : wecC (XCAW_01607)
Accession : YP_007649605.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Virulence
Product : UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1807118 - 1808410 bp
Length : 1293 bp
Strand : -
Note : -

DNA sequence :
ATGTCCGGCACCACGCTTCTCGGCCCCGCACAGGGGCGCATCGCCGTCATCGGCTTAGGTTACGTCGGCCTGCCATTGGC
GGTTGCATTCGGGGAGCAACGCGACACCGTGGGCTTCGACATCGATGCGCAGCGCGTTGCGCAACTGCGCGATGGCCACG
ATGTCACGCTGGAACTGGACGATGCCGAATTGGGTGCCGCAACGCACTTGCGCTACAGCGCAAACGCTGCGGATCTGGCT
GGGTGTCGCATTTTCATCGTGACCGTGCCGACGCCGATCGATAGCTTCGAGCAACCGGATCTGGAGCCGTTGCGTAGCGC
CACGGCCTTGATCGCCGCCGCCCTCAAGCCCGGCGATCTGGTGATCTACGAATCCACGGTCTATCCAGGAACCACTGAAG
AAGTTTGCGTGCCCTTGCTCGAAGCAACCTCCGGGCTGCGTTTCAACCACGACTTCTTTTGCGGCTACAGCCCCGAGCGC
GTCAATCCCGGCGATCGCCAGCGGCGTCTGCGTGATATCCGCAAGATCACCTCGGGCTCGACGGCAGACGCCGCCGATGC
CGTCGATGCGCTATACACCAGCATCATCACTGCCGGCACCTGGCGCGCTCCGTCGATGCGCGTGGCCGAAGCGGCAAAGG
TGGTCGAAAACATCCAGCGCGACGTCAATATCGCGCTGGTCAACGAGTTGGCGTTGATTTTCGACAAGTTGGGAATCGAC
ACCCTCGATGTGCTCGAGGCCGCAGGAACCAAGTGGAATTTCCTGCCATTTCGCCCTGGCCTGGTCGGCGGGCATTGCAT
CGGGGTGGATCCGTACTACCTGATGCACAAATCCGAAAGCGTGGGCTATCACCCGGACCTGATCCACACCGCGCGGCAGG
TCAATAATCGTGTCGGCCGACATGTAGCCGAGCGCGTGTGCGGCATGCTGGCCATGCGTGGCGTCGCGCTTGCGCAGGCG
AGGGTGCTGGTACTGGGCGCGACATTCAAGGAAAACTGCCCGGATCTGCGCAACAGCCGCGCCCTGGAATTGGTGCAGTT
GCTGCAGGCCGCGGGCGTGCAGGTGGACACCTGCGACCCGTGGGCAGACCCGGCTGAAGCGCTGCAGCACGGCGGTGTGC
GCTTAAGCGAGATGCCGGAAGATGGCGCCTACGATGCCGTCGTGCTGGCTGTGGCGCACGCGCAGTATCGCGATTACGAC
GTGGAGCGGATCGCCGCGCTCGGCAAACCGGGCGCGGTGGTGTACGACGTCAAATCGGTGTGGCCGCGTGCGGCGGTCAG
CGATCGCCTGTAG

Protein sequence :
MSGTTLLGPAQGRIAVIGLGYVGLPLAVAFGEQRDTVGFDIDAQRVAQLRDGHDVTLELDDAELGAATHLRYSANAADLA
GCRIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTTEEVCVPLLEATSGLRFNHDFFCGYSPER
VNPGDRQRRLRDIRKITSGSTADAADAVDALYTSIITAGTWRAPSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGID
TLDVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLMHKSESVGYHPDLIHTARQVNNRVGRHVAERVCGMLAMRGVALAQA
RVLVLGATFKENCPDLRNSRALELVQLLQAAGVQVDTCDPWADPAEALQHGGVRLSEMPEDGAYDAVVLAVAHAQYRDYD
VERIAALGKPGAVVYDVKSVWPRAAVSDRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-112 52
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-112 52
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-94 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wecC YP_007649605.1 UDP-N-acetyl-D-mannosaminuronate dehydrogenase VFG0431 Protein 2e-112 52