Gene Information

Name : citB (XCAW_01602)
Accession : YP_007649600.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Virulence
Product : Response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1803273 - 1803920 bp
Length : 648 bp
Strand : -
Note : -

DNA sequence :
ATGACCATCAGAGTTTTTCTGATCGACGATCATGCACTCGTGCGTACAGGCATGAAGATGATTCTGTCCAAGGAAGTGGA
TGTCGATGTGGTGGGTGAAGCAGAGAGCGGCGAAGCTGCATTGCCGCAGATTCGTCAACTCAAACCGGACATCGTGCTGT
GCGACCTGCATTTACCCGGCGTCAGCGGCCTGGAAATTACCGAGCGCATCGTCAAGGGCGACTACGGCACGCGGGTCATC
ATCGTCTCCGTGCTCGAAGACGGCCCATTGCCCAAGCGTTTGCTCGAGGCAGGCGCCTCCGGTTATGTGGGCAAGGGCGG
TGACGCGCACGAGTTGCTGCGCGCGGTGCGTGAAGTCGCATTGGGACGGCGTTACCTCGGCAACACGATCGCGCAGAACC
TGGCTCTGTCCAATCTGGAAGGTGGCGGTTCACCGTTCGATGCATTGTCGCCCCGCGAGCTGGAAGTGGCGTTGCTGCTG
ACCCAAGGGCTGCGCCAGGAAGACATCGCCAAGCGCCTGAACCTCAGCGCCAAGACCATCAACACGCACAAGGCACGCCT
GTTTGAGAAGGTCGGCATCCAGGACAACATCGCGCTGGCGCGGCTGGCCAATCAATACGGTCTGACCGATCCCTCCCGGG
TGCTGTGA

Protein sequence :
MTIRVFLIDDHALVRTGMKMILSKEVDVDVVGEAESGEAALPQIRQLKPDIVLCDLHLPGVSGLEITERIVKGDYGTRVI
IVSVLEDGPLPKRLLEAGASGYVGKGGDAHELLRAVREVALGRRYLGNTIAQNLALSNLEGGGSPFDALSPRELEVALLL
TQGLRQEDIAKRLNLSAKTINTHKARLFEKVGIQDNIALARLANQYGLTDPSRVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-41 45
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-41 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
citB YP_007649600.1 Response regulator VFG1889 Protein 2e-41 47