Gene Information

Name : XCAW_01101 (XCAW_01101)
Accession : YP_007649109.1
Strain : Xanthomonas citri Aw12879
Genome accession: NC_020815
Putative virulence/resistance : Unknown
Product : Transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1264900 - 1265910 bp
Length : 1011 bp
Strand : -
Note : -

DNA sequence :
ATGTTGACTCAGGAGCAGGCAGTGGAGATACGTGTGATGGCCCGCAGGGGCGAGAGTGTCAGAGCGATCGCGAAGCAATT
GGAGTGCTCGCGCAACACCGTGCGCAGGTACCTGCGCGATCAAGATGCGCGGCGGTACGGCCCCCGCGAGTCCAGGGCCT
GCAAGCTCGACGGCTACCAGTCCTATCTGCGTGAGCGCGTCGTGCAGGCGCATCCGCCCTGGATCCCGGCGACCGTGCTG
TTGCGCGAGATCCAGGGGCGCGGCTACACGGGCGGCATCAGCCAGCTCAAGCCCTTCCTGGCCCCGCTCAAGCAGTCCGA
GCCCGAGCCGCTGGTGCGCTTCGAGACGCCCCCGGGTCAGCAGATTCAGGTGGATTTCACTTACGTGCGCCGGGGGCGCG
ATCCGCTGCTCGCGCTGGTCGCCACCCTGGGCTACAGCCGGGCGAGCTACGTGAAGTTCGTGGCGTGCGCAGGCGAGGAC
ATAACCACCCTGTGCACCGGCCTGCGCGAGGCGTTCGATTACTTCGGCGGCGTGCCCGAGCATGTGCTGTTCGGCAACAC
CAAGGCAGTCGTCATCGAGCGCGAGGCCTACGGCGAAGGCCAGCCCCGCTGGAACAGCGCGCTGCGCGAGCTCGCCGATA
CCTGCGGTTTCAAGCCTCGTCTGTGCCCCCCCTACCGTGCCAAGACCAAGGGCAAGGTCGAGCGCTTCAATGCCTACCTC
AAGGGCAGCTTCGTGGTGCCGGTGGCGGCAACGCTGGAAGCCAGCGGGCTGCGGCTCGATGCCCACCTGGCCAACGTCCA
CGTGCGACGCTGGCTGGACGAAGTCGCCAATGCCCGTGTGCATGCCACCACCAAGGCGGTGCCGGCCGTGCGCCTGGCAG
AGGACCGTGCAGTCATGTTGGCGGCACCGGCGCTGAAGGCGCCACCACCGATACACCAGCGTGTCGTCTTGCCGCTGCCG
AGCCTGCAGCATCCGCTGTGCGTGTACGACGCCTTGCTGGAGGTGGTGTGA

Protein sequence :
MLTQEQAVEIRVMARRGESVRAIAKQLECSRNTVRRYLRDQDARRYGPRESRACKLDGYQSYLRERVVQAHPPWIPATVL
LREIQGRGYTGGISQLKPFLAPLKQSEPEPLVRFETPPGQQIQVDFTYVRRGRDPLLALVATLGYSRASYVKFVACAGED
ITTLCTGLREAFDYFGGVPEHVLFGNTKAVVIEREAYGEGQPRWNSALRELADTCGFKPRLCPPYRAKTKGKVERFNAYL
KGSFVVPVAATLEASGLRLDAHLANVHVRRWLDEVANARVHATTKAVPAVRLAEDRAVMLAAPALKAPPPIHQRVVLPLP
SLQHPLCVYDALLEVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 1e-63 45
api83 CAF28557.1 transposase Not tested YAPI Protein 1e-63 45
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 7e-64 45
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 7e-64 45
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 2e-63 45
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 7e-64 45
y2411 NP_669718.1 transposase Not tested HPI Protein 2e-63 45
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 7e-64 45
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 2e-63 45
unnamed CAA21403.1 - Not tested HPI Protein 2e-63 45
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 2e-63 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XCAW_01101 YP_007649109.1 Transposase VFG1626 Protein 4e-64 45
XCAW_01101 YP_007649109.1 Transposase VFG1607 Protein 4e-64 45
XCAW_01101 YP_007649109.1 Transposase VFG1461 Protein 1e-63 45
XCAW_01101 YP_007649109.1 Transposase VFG1514 Protein 4e-64 45