|
Name : XCAW_01062 (XCAW_01062) Accession : YP_007649072.1 Strain : Xanthomonas citri Aw12879 Genome accession: NC_020815 Putative virulence/resistance : Unknown Product : Transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1222936 - 1223946 bp Length : 1011 bp Strand : + Note : - DNA sequence : ATGTTGACTCAGGAGCAGGCAGTGGAGATACGTGTGATGGCCCGCAGGGGCGAGAGTGTCAGAGCGATCGCGAAGCAATT GGAGTGCTCGCGCAACACCGTGCGCAGGTACCTGCGCGATCAAGATGCGCGGCGGTACGGCCCGCGCGAGTCCAGGGCCT GCAAGCTCGACGGCTACCAGTCCTATCTGCGTGAGCGCGTCGTGCAGGCGCATCCGCGCTGGATCCCGGCGACCGTGCTG TTGCGCGAGATCCAGGGGCGCGGCTACACGGGCGGCATCAGCCAGCTCAAGGCCTTCCTGGCCCCGCTCAAGCAGTCCGA GCCCGAGCCGCTGGTGCGCTTCGAGACGCCCCCGGGTCAGCAGATGCAGGTGGATTTCACTTACGTGCGCCGGGGGCGCG ATCCGCTGCTGGCGCTGGTCGCCACCCTGGGCTACAGCCGGGCGAGCTACGTGAAGTTCGTGGCGTGCGCAGGCGAGGAC ATGACCACCCTGTGCACCGGCCTGCGCGAGGCGTTCGATTACTTCGGCGGCGTGCCCGAGCATGTGCTGTTCGACAACAC CAAGGCAGTCGTCATCGAGCGCGATGCCTACGGCGAAGGCCAGCACCGCTGGAACAGCGCACTGCGCGAGCTCGCCGATA CCTGCGGTTTCAAGCCTCGTCTGTGCCGCCCCTACCGTGCCAAGACCAAGGGCAAGGTCGAGCGCTTCAATGCCTACCTC AAGGGCAGCTTCGTGGTGCCGCTGGCGGCAACGCTGGAAGCCAGCGGGCTGCGGCTCGATGCCCACCTGGCCAACGTCCA CGTGCGACGCTGGCTCGACGAAGTCGCCAATGCCCGTGTGCATGCCACCACCAAGGCGGTGCCGGCCGTGCGCCTGGCAG AGGAGCGTGCAGTCATGTTGGCGGCACCGGCGCTGAAGGCGCCACCACCGATACACCAGCGTGTCGTCTTGCCGCTGCAG AGCCTGCAGCATCCGCTGTGCGTGTACGACGCCTTGCTGGAGGTGGTGTGA Protein sequence : MLTQEQAVEIRVMARRGESVRAIAKQLECSRNTVRRYLRDQDARRYGPRESRACKLDGYQSYLRERVVQAHPRWIPATVL LREIQGRGYTGGISQLKAFLAPLKQSEPEPLVRFETPPGQQMQVDFTYVRRGRDPLLALVATLGYSRASYVKFVACAGED MTTLCTGLREAFDYFGGVPEHVLFDNTKAVVIERDAYGEGQHRWNSALRELADTCGFKPRLCRPYRAKTKGKVERFNAYL KGSFVVPLAATLEASGLRLDAHLANVHVRRWLDEVANARVHATTKAVPAVRLAEERAVMLAAPALKAPPPIHQRVVLPLQ SLQHPLCVYDALLEVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAB46599.1 | IS100 transposase | Not tested | HPI | Protein | 2e-66 | 48 |
| api83 | CAF28557.1 | transposase | Not tested | YAPI | Protein | 2e-66 | 48 |
| s0035 | CAD33773.1 | ORF A protein | Not tested | PAI I 536 | Protein | 9e-67 | 48 |
| y1094 | CAD42088.1 | OrfA protein of IS100 transposase | Not tested | PAI II 536 | Protein | 9e-67 | 48 |
| y1093 | YP_002346890.1 | transposase for insertion sequence IS100 | Not tested | HPI | Protein | 2e-66 | 48 |
| orfA | CAE85182.1 | OrfA protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 9e-67 | 48 |
| y2411 | NP_669718.1 | transposase | Not tested | HPI | Protein | 2e-66 | 48 |
| y1094 | CAC43410.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 9e-67 | 48 |
| YPTB1585 | YP_070113.1 | transposase | Not tested | HPI | Protein | 2e-66 | 48 |
| unnamed | CAA21403.1 | - | Not tested | HPI | Protein | 2e-66 | 48 |
| y1093 | CAD33720.1 | ORF A protein | Not tested | PAI I 536 | Protein | 2e-66 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XCAW_01062 | YP_007649072.1 | Transposase | VFG1626 | Protein | 5e-67 | 48 |
| XCAW_01062 | YP_007649072.1 | Transposase | VFG1607 | Protein | 5e-67 | 48 |
| XCAW_01062 | YP_007649072.1 | Transposase | VFG1514 | Protein | 5e-67 | 48 |
| XCAW_01062 | YP_007649072.1 | Transposase | VFG1461 | Protein | 1e-66 | 47 |
