Gene Information

Name : HydSN_0933 (HydSN_0933)
Accession : YP_007647327.1
Strain : Hydrogenobaculum sp. SN
Genome accession: NC_020814
Putative virulence/resistance : Virulence
Product : Fe-S-cluster-containing hydrogenase subunit
Function : -
COG functional category : -
COG ID : -
EC number : 1.8.-.-
Position : 847403 - 848242 bp
Length : 840 bp
Strand : +
Note : IMG reference gene:2507463596; PFAM: 4Fe-4S dicluster domain; 4Fe-4S binding domain

DNA sequence : 
ATGGATAGAAGAGGTTTTTTCAAAGCCATAGGCGCCGCTATTGGCGTTGTAGCATCTGAAAAAGCTGCAGAAGCTATGGA
AATACCTCCTATGCTTACAATACCTGGAAGAGAGGAAAACAATCCTCAGTGGGTAGGCCAAAAAGGCAAGAAATTTGCCA
TGGTTATGGATTTAAGGAAATGCATAGGATGCCAAGCTTGCACGTCTGCTTGTGTTATAGAAAACGATGTACCCACAGAT
CAATACAGAACATACGTACCTGAATATGAAGTTGGCACTTTTCCAAACGTAAGAAAAGTTTTTTTACCTCAGCTTTGTAA
CCACTGCGAAAATCCTCCTTGCGTTCCTGTTTGTCCAACCGGTGCCACTTACAAAAGACAAGATGGTATAGTGGTAGTTG
ACAACACGATATGCTGGGGTTGTGGATACTGTGTAAACGCTTGCCCTTACGACAAAAGATTCATGAACGAAAAAAGTCAT
GTAGCAGACAAGTGTACTTTTTGCGCTCACAGGGTAGATAACGGCATGCTACCAGCTTGCGTAGAATCGTGCGTAGGCGG
GGCGAGAATATTTGGAGATTTAAACGATCCAAACAGTGAAGTTTCAAGGCTTATAAGAACATATCCGGTAAACGTTTTAA
GACCTGAGCAAGGCACTATACCAAACGTATTTTACATAAACCTCTACGGAGAGCTTCAAGATACACCACCTACTAACTTT
GAAAGCTTGGATGACCTTGCCAGAGAATATTACAAAATAAAATCTGAAGAGTCCGAGTGGATGATTTTAAAGCCGCTTCA
AGATATAGTAAATGTGGAGGATTACAAACATGATGCTTGA

Protein sequence : 
MDRRGFFKAIGAAIGVVASEKAAEAMEIPPMLTIPGREENNPQWVGQKGKKFAMVMDLRKCIGCQACTSACVIENDVPTD
QYRTYVPEYEVGTFPNVRKVFLPQLCNHCENPPCVPVCPTGATYKRQDGIVVVDNTICWGCGYCVNACPYDKRFMNEKSH
VADKCTFCAHRVDNGMLPACVESCVGGARIFGDLNDPNSEVSRLIRTYPVNVLRPEQGTIPNVFYINLYGELQDTPPTNF
ESLDDLAREYYKIKSEESEWMILKPLQDIVNVEDYKHDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-56 49
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-56 49
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 3e-56 49
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 2e-56 49
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 3e-56 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HydSN_0933 YP_007647327.1 Fe-S-cluster-containing hydrogenase subunit VFG0486 Protein 1e-56 49